Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241984g00009 ATGGCCGGCATAGACTTAGGTTCAGCATCACACTTTGTTCATCACCTTCAACGCCCTGACCTTGAAGATGATGATAATAACCAAGACCAAGACCCGAGCAACAACCATCACGAAGGCCTTGACCTAATTTCACCAAATCATCAAGGCCCTGGCGATGTTGTTGCTCGGAGACCAAGAGGTAGACCCCCAGGCTCCAAGAACAAGCCTAAGCCACCGGTGATCATCACAAGGGAGAGTGCAAACACTCTTAGGGCACACATCCTTGAAGTTAGTAGCGGTTGTGATGTGTTTGACTCCGTCGCCACCTATGCAAGAAAACGTCAAAGGGGGATTTGTGTCCTTAGCGGTAGTGGAACCGTCACCAACGTCACACTCCGACAGCCAGCAGCTGCCGGAGCAGTTGTGACTCTTCATGGAAGATTTGAGATACTTTCCTTGTCAGGATCCTTCCTACCACCTCCTGCTCCACCAGGAGCTACAAGTTTGACTGTATTTCTTGGTGGAGGCCAGGGCCAGGTCGTAGGAGGAAATGTTGTTGGGCCTTTAGTGGCTTCTGGGCCTGTTATTGTTATTGCCTCATCATTCACTAACGTGGCATATGAGAGGTTGCCCTTAGATGAAGATGAGACTATTCAGATGCAGCAAGGGCAACCTTCTGGTGGTGGTGGCGGCGGTGTTAATAACTCTTTTCCAGACCCTTCTTCGGGGCTACCGTTCTTCAATCTACCTCTAAACATGCCTAATATGCCGGTTGATGGTTGGGCCGGTGGAAACTCTAGTGGTGGAAGACAATCTTTTTGA 801 0.4981 MAGIDLGSASHFVHHLQRPDLEDDDNNQDQDPSNNHHEGLDLISPNHQGPGDVVARRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVSSGCDVFDSVATYARKRQRGICVLSGSGTVTNVTLRQPAAAGAVVTLHGRFEILSLSGSFLPPPAPPGATSLTVFLGGGQGQVVGGNVVGPLVASGPVIVIASSFTNVAYERLPLDEDETIQMQQGQPSGGGGGGVNNSFPDPSSGLPFFNLPLNMPNMPVDGWAGGNSSGGRQSF 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241984g00009 266 MobiDBLite consensus disorder prediction 17 74 - -
Stsc241984g00009 266 MobiDBLite consensus disorder prediction 17 36 - -
Stsc241984g00009 266 CDD DUF296 84 159 IPR005175 -
Stsc241984g00009 266 Pfam Plants and Prokaryotes Conserved (PCC) domain 84 197 IPR005175 -
Stsc241984g00009 266 SUPERFAMILY AF0104/ALDC/Ptd012-like 80 213 - -
Stsc241984g00009 266 ProSiteProfiles PPC domain profile profile. 80 217 IPR005175 -
Stsc241984g00009 266 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 26 218 IPR014476 GO:0003680
Stsc241984g00009 266 MobiDBLite consensus disorder prediction 213 232 - -
Stsc241984g00009 266 FunFam AT-hook motif nuclear-localized protein 83 210 - -
Stsc241984g00009 266 Gene3D - 83 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241984g00009 Stsc-Chr241984 40001 41472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241984g00009 1 266 AT-hook Motif Nuclear Localized (AHL) Family AT2G35270 56.908 2.71e-97 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241984g00009 - - gmx:100814613 393.275