Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241984g00007 ATGTTATCAGAGTTGATGAACTTTTGTAGGGCCTGCTTTCGGCCAGGTTCGGATAAGTATGGACATGGCGGTACAGATGCCGGAGGTAAGCAGGATGGACTCTTGTGGTACAAAGACTACGGGCAGCACTTGCACGGCGAGTTTTCGATGGCTGTTGTCCAAGCCAACAACTTACTGGAGGATCAGAGCTCTATCAGATCAGGAAGTTTGAGCACGAATGAGTCCGGTCCTTTCGGAACCTTTGTTGGTGTCTATGACGGCCATGGAGGGCCGGAGACATCAAGATTTATCAATGAACATCTAGTTCACCATCTTAAGAGGTTTAGTGCAGAGCAACAATCAATGTCAGTGGATGTTATTCGCAAATCGTTCCAAGCGACAGAAGAAGGATTTACATCCCTTGTTGCCACACAATGGTCGATGAAACCGCAAATTGCAGCTGTTGGATCATGCTGTCTTGTTGGTGTTATATGCAATGGAACTCTTTATGTGGCGAATGTTGGTGATTCCCGGGCTGTTATGGGAAGAGCAGTTAAGGCAACTGGGGAAGTTTTGGCTGTGCAGTTGTCTGCCGAGCACAATGCATCGATAGAATCCGTAAGACAAGAGCTGAAATCTATGCACCCAGATGATTCACAGATTGTTGTTCTTAAGCATAATGTGTGGCGTGTGAAGGGCCTTATCCAAGTTTCTAGATCTATAGGCGATGTATATCTTAAAAAGGCCGAGTTCAACAGAGAACCTCTATATGCAAAGTTTCGCCTTCGCGAACCAATCAAGAAGCCTATATTGAGCTCAGAACCATCGATATCAGTGCACCAGTTGCAGCCACAAGATCAGTTTGTTATATTCGCATCTGATGGGCTTTGGGAGCACTTCAGTAATCAAGAGGCAGTGGATATAGTTCAACAAAATCCTCGGAATGGAATTGCAAGGAGGCTGATTAAGATTGCCCTTCAAGAAGCAGCAAAGAAAAGAGAAATGAGATATTCAGACCTTAAGAAAATCGACCGTGGTGTTCGTCGCCATTTCCACGACGATATCACCGTGATTGTTGTGTTCATAGACTCGACTTTCGTGAGCAGGGCAACCTCCGTCAAATTCCCGAGTATTTCTCTTAGAGGCGGCGGAGTCCACCTGCCTTCTAACACACTCGCACCGTGTACTACTCCGACGGAGGCCGGCGCTACCTGA 1194 0.4657 MLSELMNFCRACFRPGSDKYGHGGTDAGGKQDGLLWYKDYGQHLHGEFSMAVVQANNLLEDQSSIRSGSLSTNESGPFGTFVGVYDGHGGPETSRFINEHLVHHLKRFSAEQQSMSVDVIRKSFQATEEGFTSLVATQWSMKPQIAAVGSCCLVGVICNGTLYVANVGDSRAVMGRAVKATGEVLAVQLSAEHNASIESVRQELKSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNREPLYAKFRLREPIKKPILSSEPSISVHQLQPQDQFVIFASDGLWEHFSNQEAVDIVQQNPRNGIARRLIKIALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFIDSTFVSRATSVKFPSISLRGGGVHLPSNTLAPCTTPTEAGAT 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241984g00007 397 CDD PP2Cc 48 355 IPR001932 -
Stsc241984g00007 397 SUPERFAMILY PP2C-like 55 356 IPR036457 -
Stsc241984g00007 397 Pfam Protein phosphatase 2C 80 324 IPR001932 -
Stsc241984g00007 397 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Stsc241984g00007 397 SMART PP2C_4 41 353 IPR001932 -
Stsc241984g00007 397 FunFam Phosphatase 2C family protein 36 365 - -
Stsc241984g00007 397 Gene3D - 37 365 IPR036457 -
Stsc241984g00007 397 PANTHER PROTEIN PHOSPHATASE 36 353 IPR015655 GO:0004722|GO:0006470
Stsc241984g00007 397 ProSiteProfiles PPM-type phosphatase domain profile. 44 355 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241984g00007 Stsc-Chr241984 25926 29033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241984g00007 1 396 PP2C-type Phosphatase Gene Family AT4G38520 73.232 0.0 632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241984g00007 - K01102 jre:109006616 680.248