Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241982g00007 ATGGCTGCAAGAGAAATCCTCCATAAGATGAAGGAAAAAGTTGGGCTGCGTTCATCGGAACCTGATTCGGGGAAAGGAAAGAGCAAGATGTCAAGGCATGTAACTCATGGATATCACTTAGTAAAGGGAAGATCATACCATGCCATGGAGGATTTTGTTGTTGCTGAATTTAAGCAAGTTGATAGCAATGAACTGGGTTTGTTTGCAATATTCGATGGCCATGCCGGTCACAATGTGCCTAATTACTTGCGGTCTCACTTGTTTGAAAATATCTTAAAAGAGCCTGACTTCTGGAAAGATCCTGAAAATGCTGTCAGGAGAGCCTATAGTGTAACCGATTCTAGCATTTTGGAGAAATCAGGTGAATTGGGTAGAGGAGGTTCAACTGCCGTTACCGCAATATTGATGAACTGTCAGAAGTTAGTCATAGCTAACATCGGTGATTCTCGGGCCGTCTTGTGCAAGAAAGGCCTCGCCAAACAACTTTCAGAGGATCATGAGCCACACACTGAAAGTGAAGATATAAAGAATAGAGGTGGTTTTGTATCAAAATTTCCAGGTGACGTTCCAAGGGTTGATGGCCGGTTGGCGCTTGTACAAGATGATGTAGAATTCCTCATATTAGCAAGTGATGGATTATGGAAGGTAATGTCAAATCAAGAAGCAGTTAATACCATCAAAGACATCAAAGATGCTCGCGCTTCGGCGAAACGCCTAACCGAAGAAGCACTTAACAGGAAAAGCACAGATGATATATCCTGCATTGTTGTGAAATTTCAGTAA 783 0.4227 MAAREILHKMKEKVGLRSSEPDSGKGKSKMSRHVTHGYHLVKGRSYHAMEDFVVAEFKQVDSNELGLFAIFDGHAGHNVPNYLRSHLFENILKEPDFWKDPENAVRRAYSVTDSSILEKSGELGRGGSTAVTAILMNCQKLVIANIGDSRAVLCKKGLAKQLSEDHEPHTESEDIKNRGGFVSKFPGDVPRVDGRLALVQDDVEFLILASDGLWKVMSNQEAVNTIKDIKDARASAKRLTEEALNRKSTDDISCIVVKFQ 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241982g00007 260 ProSiteProfiles PPM-type phosphatase domain profile. 35 259 IPR001932 -
Stsc241982g00007 260 MobiDBLite consensus disorder prediction 12 29 - -
Stsc241982g00007 260 ProSitePatterns PPM-type phosphatase domain signature. 67 75 IPR000222 GO:0043169
Stsc241982g00007 260 MobiDBLite consensus disorder prediction 12 34 - -
Stsc241982g00007 260 SUPERFAMILY PP2C-like 31 259 IPR036457 -
Stsc241982g00007 260 CDD PP2Cc 36 259 IPR001932 -
Stsc241982g00007 260 Coils Coil 222 242 - -
Stsc241982g00007 260 SMART PP2C_4 33 257 IPR001932 -
Stsc241982g00007 260 PANTHER PROTEIN PHOSPHATASE 26 259 IPR015655 GO:0004722|GO:0006470
Stsc241982g00007 260 Gene3D - 30 260 IPR036457 -
Stsc241982g00007 260 Pfam Protein phosphatase 2C 201 252 IPR001932 -
Stsc241982g00007 260 Pfam Protein phosphatase 2C 47 198 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241982g00007 Stsc-Chr241982 44169 46729 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241982g00007 1 260 PP2C-type Phosphatase Gene Family AT3G15260 63.668 4.77e-138 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241982g00007 K17506 - gmx:100500617 436.802