Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241982g00005 ATGTTTCTACACTTGGGACGCACTCCAACCCTAGTGGTTTCATCCGCTAAGGTGCTGAATGAAATTATGAAAAATCATGAGTTGACATTCTCCAACCGATTCCAAACAACCGCCATGAGAATCTTGATGTATGGACGCAACAACATCGGGTTCCAAAACTATGGAGAAAATTGGAAACAAAAGAGAAATATTTGTGTCCATGAACTCCTAAGCCCTAAAATGATGCAATCAATTCGCTTGATTAGAGAAGAAGAAGTCATGAAATTGGTGAACAATAATTTACGTGAAGCAATAAATAATGGTAGCGATGTGAATTTAAGTGAGATGATTTTTGATACATTAAATAGTATCACGTGTAAATGTGTCCTTGGATGCAATACACAAGATTATGGTTATGAAAATGCAAAAGGGCTAGCTAGAAAAATGATTAACCAACTTGGAGTTCTTACTTTGGGAGATCACTTTCCTTGGTTGAGTTGGGTTGAAGATGTTCTTAGCGGCCAAGTTCAAGAATTCAAAGAAACTTTTGGAGCATTTGATGCACTTTATGATGAGGTGATTGTAAAAAAGCACAAGAAGAAGAAGATGAGGACGGAAAATCATCATGAGAATAGCTTTGTTGATATTCTCATCCAACTCCAAGAGGATGGGCACTATGACCTCTCAAATGGTGATATCAAAGGAATTATAATGGACCTGTTTGCCGCAGGAAGTGCTACAACTTCAGCAGTAGTAGAATGGGCAATGACCGAGTTAATGAAAAATCCAATCACAATGAAGAAAGCACAAGAAGAGGTTAGAAGGGTTGTGGGGCAAAAATGTATAGCAGAAGAAAGCCATATCAATAAAATGGAGTTTTTAAAATATGTGGTGAAAGAAACTCTAAGATTGCATCCATCAGCACCTCTCTTGCTTCCTAGAGAAACATCAACCAGTGTAAAACTCAACGGTTATGACATTCCTGAAAAAACAATGGTATGTGTGAACGTATGGGCTATACAAAGAGATCCAGAATATTGGGAAAGGGCAGAAGAGTTCATTCCAGAGAGACATGAACATAGCAAAGTTCGTTACAATGGTCAAGACTCACAATTTGCACCATTTGGTTTTGGGAGAAGAGGATGTCTGGGAATGAGTTTTGCACTTGATTCTGCTGAGTATATGCTTGCTAACCTTCTTTGTTGCTTCAATTGGAACATGCCTCCACAAGGCATAGACATCACCGAGGCAGATGGGCTAGTTTCTGCCATGAAATTCCCACTTCATCTTAACCCAATTCCATTTTCTTTTAAACAAGAACAGTAA 1305 0.3847 MFLHLGRTPTLVVSSAKVLNEIMKNHELTFSNRFQTTAMRILMYGRNNIGFQNYGENWKQKRNICVHELLSPKMMQSIRLIREEEVMKLVNNNLREAINNGSDVNLSEMIFDTLNSITCKCVLGCNTQDYGYENAKGLARKMINQLGVLTLGDHFPWLSWVEDVLSGQVQEFKETFGAFDALYDEVIVKKHKKKKMRTENHHENSFVDILIQLQEDGHYDLSNGDIKGIIMDLFAAGSATTSAVVEWAMTELMKNPITMKKAQEEVRRVVGQKCIAEESHINKMEFLKYVVKETLRLHPSAPLLLPRETSTSVKLNGYDIPEKTMVCVNVWAIQRDPEYWERAEEFIPERHEHSKVRYNGQDSQFAPFGFGRRGCLGMSFALDSAEYMLANLLCCFNWNMPPQGIDITEADGLVSAMKFPLHLNPIPFSFKQEQ 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241982g00005 434 Gene3D Cytochrome P450 1 427 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241982g00005 434 PRINTS P450 superfamily signature 236 253 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241982g00005 434 PRINTS P450 superfamily signature 289 300 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241982g00005 434 PRINTS P450 superfamily signature 366 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241982g00005 434 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241982g00005 434 Pfam Cytochrome P450 3 404 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241982g00005 434 PRINTS E-class P450 group I signature 245 271 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241982g00005 434 PRINTS E-class P450 group I signature 225 242 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241982g00005 434 PRINTS E-class P450 group I signature 329 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241982g00005 434 PRINTS E-class P450 group I signature 288 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241982g00005 434 PRINTS E-class P450 group I signature 365 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241982g00005 434 PRINTS E-class P450 group I signature 375 398 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241982g00005 434 PRINTS E-class P450 group I signature 18 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241982g00005 434 PANTHER CYTOCHROME P450 71B11-RELATED 1 426 - -
Stsc241982g00005 434 SUPERFAMILY Cytochrome P450 2 427 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241982g00005 434 Coils Coil 80 100 - -
Stsc241982g00005 434 CDD CYP71-like 1 421 - -
Stsc241982g00005 434 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 368 377 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241982g00005 Stsc-Chr241982 16078 19137 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241982g00005 1 425 Cytochrome P450 AT3G26210 38.940 1.53e-99 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241982g00005 K20617 - gmx:100785621 474.937