Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241981g00001 ATGACCACGAAATTCAAAGATTTTAAGGAGTTTAGGTTCAGCGAGTCGATTCGACACCCCTCGAATCGATTCCTTCGTGACAAAAACCTGCATTTTCAGCCAAAATCTCTTTCAATCCAATTCCATCTCAACATCCCATTTTCAAACAAACCAAACCATTCCATCATTCGTTCCACATCATCATCTCATCTCAATTTCTCAACTCAATCATTTCCAATCCACTTCCTATCTACTCAATCCATGTGGGGACGTGAGCTTCACGTAGCCGGCGACGTTGCGGCGATCGGAGCTCCGGTAACTGAACAACCTACAACTGATCATCATGTAGATCCAGAGGAAGGGATGTGCTTCGGCACATTAGAAGAGGCACGCAATTACTATCAAAGATATGCAGAGACGGTTGGCTTTGTTATTAAGATAAGAAACACTAATTGGGAGACTAGAAATGGTGACAGAGTACCTATTAATCAATCATTACATTGTAACAAGGATGGGTATCGCGTATCTCGTGTCAAGCCACTGGAGAGAGGGAAGACAGTAGCTTCTGTAGGATGTGGAGCTCGATGTCATATATCATTTGACAAGACATGCACGTGCTGGAAGATTTCGATTAGAACTATCACACTCACATCTTCTAAAACCAAAGTTATCTAG 654 0.4235 MTTKFKDFKEFRFSESIRHPSNRFLRDKNLHFQPKSLSIQFHLNIPFSNKPNHSIIRSTSSSHLNFSTQSFPIHFLSTQSMWGRELHVAGDVAAIGAPVTEQPTTDHHVDPEEGMCFGTLEEARNYYQRYAETVGFVIKIRNTNWETRNGDRVPINQSLHCNKDGYRVSRVKPLERGKTVASVGCGARCHISFDKTCTCWKISIRTITLTSSKTKVI 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241981g00001 217 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 104 194 - -
Stsc241981g00001 217 Pfam FAR1 DNA-binding domain 125 201 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241981g00001 Stsc-Chr241981 1711 3355 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc241981g00001 FAR1 6.4e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241981g00001 - - ahf:112775207 142.895