Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241980g00003 ATGGTTTTTAGCTCCCGTTTGGTATACTACCTCCTCAGACCCTTAAGTCAGCCTCATCTTGTTTCTGATCTTCTTGCGGGTATTGTGCTAAGTTCATTACTTCAGCTGGGAGGGGATGGGATTCTGAGAGACATTTTCCCTATAAAGATCATACTTGCTATTGCAACCATAGCACAAGTGGGTCTCATCTTCTATGTCTTCCTCACAGGGCTTGAGATGAACCTAGATTTTGTTTTAAGAGCACCTAAGAAGCCTACAATAATTGCAATTTGCAGCACTTTGGTTCCAATGATGTTGGGAACTTTCAGCTATTCTTTGGTAACAATAGTGGACAAGAAATTGTTAAAGAAGTCTGGTGAAACATATCAGTACAATAGACCCCAATGCTATTTTATGTGGTCTATGGTTCTTAGTATCACAGGTTTCCCTGTCCTTGCAAACATCCTTGTTGACCTTAAGCTTCTCTACACTAGGCTTGGTAAATTGGCATTAACAGTAGCAACACACAATGACTTTTATAATTGGCTTATGTTTGCAATGGTGGTCCCATTTTTTGTTAATGGTTACAGAGCTGTTTACTCAATGCTGTGTGTCATAGCTTTTATCCTCTTAAGCCACTTTGTGTTACGCCCTTTGCTAGAGAAGATAGTAGCCAAGAAACCCAACAAACATGAATGGACCAATTACCAGTTGTCCTTTGTGATTATGGGGCTTTTCGCTTGCACGGGGCTCACCGATATCCTCGGCGCGAATCCCCTTGTCGGGGCGTTGATTTACGGGCTTGCCATTCCACGCGGGAGTTTTGCGGAGTTGTTGATCGAGAGATCGGATGATTTCGGATCGAGATACTTAGCACCCTTGTTCTTTGTCAGTTGTGGCTTGAGGACCAACCTAGTGAAGGTTTTGCAGCATGCAGAGGGGTGTTTGGTTGTTATAGCAGTGATTTTATCTATCTGCACAAAGATTGTTACTACATTTGCAGTTACTCGCTACTATGGTATGCCTTTCAGAGAGAGTTTGGCTTTTGGGTTGCTTATGAACACCAAAGGCATCTTGTCACTCATAGTGCTCAACATTGCATGGGACAAACAGCTTATGAGTGGATACGCATTCTCAATCATGACGCTCACTATTCTAATAATGACTTTCATGGTGTCGCCCATAATCAACGTCATATACAGGCCGAAAAGGGCGTATAGGATGAACATGCTAAGGACCATACAAAACCTAGGGTTTCAAACAGAAGTCCGAATCATGGTTTGTGTGCACAATCCTCGCCATGCCACCGGAATGGTGAATATCCTCGAGGCCTTAAGCGGGGTCTGTGTTTCGTCTTTGCGAGTAACAGCAGCTCAACTCATTGAGCTCAAAGGTCGTGTCACCGGCCTTGTCTCTGCCCAACTTGAGCATCAAAGCTCAATCCAACATTTCTCACACTCACAATCACAGTCATTAGAGGACATGGAAACGATTGCAAACCATTTCCAATTCTTCACACAAGTGCATAGTGGCAACCATGCGGATACCTGCATGATCATGTCACCTTTCAACACGATTAACCGCGACATATACAATCTAGCTATGGAGAAACAAGCATCATTGGTACTCCTTCCTTTTCACAAGCATTGGAGCTCCGAAGGCAACCTAGAGGTAACTAATGAGGTGTTCAGCGAGATAAACCAGAATGTGATGAAAGATGCCCCGTGCTCCGTGGGGCTCTTCGTTGATCGCAGCCTTAATTCATTGTTGAAGGCCAATTTGCACATCGTCATGTTATTTATAGGGGGTCCTGACGACCGCGAAGCCTTAGCTATCGCGTGGAGGATGACAGGACACCAAAGGATACGACTCACTATGGTGAGGATTATTTTGTGTGGCGAGGCTGCATTGGAGGGTCATAAAAAGGAATCTAGCCATGGGGAACTACTATCAGCAGTGCTAGATAAGAATAAGGAACGAGAGTTGGATGATAGCTGTGTGAGTAATTTTAGGATTATGGGAGTGAACAATAAGGACACAATGAAGTACGAAGAGAGGCAAGTGGAAAGTGGTTATGGTATCCCTAGAGTGCTTAATGAAATTGATCAAAAGGGTTATGATCTATATGTTTTGGGACAGGGGAAAGGTAGGCACTCAAGTGTGTTATCCGAAATGTTGAATTGGAGTGATTTCCCTGAACTTGGAGTTATTGGGGACTTAGTGGCATCAAATAGCTTTGGTTCCTCATCTTCTGTGCTTGTTGTGCAGCAATATGGGTATGGGGGAATGGAATTTGGTAGAAATCACGATAACAACTCTAGTTGTCATCCTTCTATTCACAAACTACCTTCAATGGCAAGATCACTAAGTAGAATGTTTTGA 2361 0.4346 MVFSSRLVYYLLRPLSQPHLVSDLLAGIVLSSLLQLGGDGILRDIFPIKIILAIATIAQVGLIFYVFLTGLEMNLDFVLRAPKKPTIIAICSTLVPMMLGTFSYSLVTIVDKKLLKKSGETYQYNRPQCYFMWSMVLSITGFPVLANILVDLKLLYTRLGKLALTVATHNDFYNWLMFAMVVPFFVNGYRAVYSMLCVIAFILLSHFVLRPLLEKIVAKKPNKHEWTNYQLSFVIMGLFACTGLTDILGANPLVGALIYGLAIPRGSFAELLIERSDDFGSRYLAPLFFVSCGLRTNLVKVLQHAEGCLVVIAVILSICTKIVTTFAVTRYYGMPFRESLAFGLLMNTKGILSLIVLNIAWDKQLMSGYAFSIMTLTILIMTFMVSPIINVIYRPKRAYRMNMLRTIQNLGFQTEVRIMVCVHNPRHATGMVNILEALSGVCVSSLRVTAAQLIELKGRVTGLVSAQLEHQSSIQHFSHSQSQSLEDMETIANHFQFFTQVHSGNHADTCMIMSPFNTINRDIYNLAMEKQASLVLLPFHKHWSSEGNLEVTNEVFSEINQNVMKDAPCSVGLFVDRSLNSLLKANLHIVMLFIGGPDDREALAIAWRMTGHQRIRLTMVRIILCGEAALEGHKKESSHGELLSAVLDKNKERELDDSCVSNFRIMGVNNKDTMKYEERQVESGYGIPRVLNEIDQKGYDLYVLGQGKGRHSSVLSEMLNWSDFPELGVIGDLVASNSFGSSSSVLVVQQYGYGGMEFGRNHDNNSSCHPSIHKLPSMARSLSRMF 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241980g00003 786 Gene3D - 1 401 IPR038770 -
Stsc241980g00003 786 Pfam Sodium/hydrogen exchanger family 2 388 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Stsc241980g00003 786 PANTHER CATION/H + ANTIPORTER 3 752 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241980g00003 Stsc-Chr241980 22580 26227 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241980g00003 11 751 Antiporter Super Family AT2G13620 33.067 1.47e-150 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241980g00003 - - ahf:112711086 1229.54