Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241975g00004 ATGGATTTTCTTTCGCTTCTTCCAACAATTCTCTTAGCATTAGGCTTAGTGCTTATTATCTACAACATATGGAGACTAAAAAATTCTAGTGATGATGAAACCAATAAGAAGGTTCAAGAAGCACCAGAAATAGCAGGTGGCTTACCTTTGATTGGTCACCTTCATATATTATTTAGAGCCAAAGGAACACCACTTGCAAGAACCTTCTCTTCTTTTGATGATAAGTATGGCCCCATATTCCAAATCCGTCTGGGATCATGCCCTGCCATTGTGGTCTCCAACAAAGACGCAATCAAGGAGTGTTTCACAACAAACGACCTTGCTTTAGCCTCACGCCCCAAATCTAGCCCTGAAATTCACCTTCATTACAGCTTTGCTGTTGGGTTTGCAGCTGCTCCTTATGGTCCCTATTGGACAAAGATGAGAAAGCTAGTTATGGTTGAACTTCTATCTCCACGTCGCATTGATTCGCTGAGGCATGTTTTTGAATCGGAGATTGATCATTTCATCCATGATTTGATGTCGTATCTTGGTGGCGCTTCCAAGGTTAAGGTTGTCATGAGTGAGTGGTTGGAACGCCTTTCATTCAATATTATCACAAGGATGATTGCAGGAAAGAGTTTCAACTACTTGAAAAACGTGGACGATAAAGAAGCAAATAGAATTCTGAAGCTTATAAGAGAATTCACGCATATTGTTGGGGAGTTTGTTCCTTCAGATTTGATTCCAATAATTGGATGGTTTCCAATAGAAGGACAAGTGCTGAAGAACAGGAAACGAATTGGAAAAGATATGGATAAACTTGTGGGAAGCTGGGTTGAAGAGCATCAACATATGAAGATTGAGTTCGATAATAATAACGAAACAAGTGAGAAACAAGATTTGATTGATGTTATGCTATCTGTTATTGAAGATGATCCTTCTTCTGGCCTAACCCGAGACAATATCATCAAGGCCAATGTTACGAATCTCATTATAGGAGGGTCAGACACAACAGCGATTTCAATGACTTGGATCCTAACGATGCTGTTGAGCAATAAACATGTTCTGAAACGTGCACAAGAAGAAATTGATCTTCATGTGAGTAAAAACAGAAAGGTTGAAGCATCAGATGTTAAAAACCTTGTTTATTTACAAGCAATTCTTAAAGAAACTCTAAGATTGTATCCACCAGCACCTCTATCAATACCTCACGAAGCAAGAGAAGATTTTTACATTCATGGCTATTACGTGCCAAAAGGGACACGTGTCTTTGCTAATGTGTGGAAGCTGCATAGAGATCCAAGTATTTGGTCGGAGCCTGAGAAGTTTTCACCAGAGAGGTTCATTAATGGCAATGGAGAACTCAATGAAGATCATCATCTTGAATACCTTCCGTTTGGATTAGGTAGAAGAGCTTGCCCTGGATACACATTTGCCACTCAAGTGATTCTCATGTCACTTGCTCGCTTCCTTCAAAGTTTTGATTTGGATACAGCAATGGATGATGAACCTGTTGACATTAGAGAAGGCTTTGGCTTAACCTTGCCCAAGTTGACTCCATTAACAATCCTATTGACCCCGCGAGCTAATGCTTCCATATGA 1584 0.3996 MDFLSLLPTILLALGLVLIIYNIWRLKNSSDDETNKKVQEAPEIAGGLPLIGHLHILFRAKGTPLARTFSSFDDKYGPIFQIRLGSCPAIVVSNKDAIKECFTTNDLALASRPKSSPEIHLHYSFAVGFAAAPYGPYWTKMRKLVMVELLSPRRIDSLRHVFESEIDHFIHDLMSYLGGASKVKVVMSEWLERLSFNIITRMIAGKSFNYLKNVDDKEANRILKLIREFTHIVGEFVPSDLIPIIGWFPIEGQVLKNRKRIGKDMDKLVGSWVEEHQHMKIEFDNNNETSEKQDLIDVMLSVIEDDPSSGLTRDNIIKANVTNLIIGGSDTTAISMTWILTMLLSNKHVLKRAQEEIDLHVSKNRKVEASDVKNLVYLQAILKETLRLYPPAPLSIPHEAREDFYIHGYYVPKGTRVFANVWKLHRDPSIWSEPEKFSPERFINGNGELNEDHHLEYLPFGLGRRACPGYTFATQVILMSLARFLQSFDLDTAMDDEPVDIREGFGLTLPKLTPLTILLTPRANASI 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241975g00004 527 Gene3D Cytochrome P450 31 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241975g00004 527 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241975g00004 527 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241975g00004 527 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241975g00004 527 PANTHER CYTOCHROME P450 82C3-RELATED 17 525 - -
Stsc241975g00004 527 FunFam Cytochrome P450 82C4 31 520 - -
Stsc241975g00004 527 Pfam Cytochrome P450 47 512 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241975g00004 527 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
Stsc241975g00004 527 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241975g00004 527 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241975g00004 527 PRINTS E-class P450 group I signature 379 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241975g00004 527 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241975g00004 527 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241975g00004 527 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241975g00004 527 PRINTS E-class P450 group I signature 420 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241975g00004 527 PRINTS E-class P450 group I signature 194 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241975g00004 527 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241975g00004 527 SUPERFAMILY Cytochrome P450 47 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241975g00004 527 Coils Coil 350 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241975g00004 Stsc-Chr241975 9157 16771 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241975g00004 41 522 Cytochrome P450 AT4G31940 46.247 1.79e-147 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241975g00004 - - gmx:100790675 645.966