Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241975g00002 ATGGTCAGGTATTTCAACTACTTGAAAAATGTGGACGACAAAGAAGCAAATAGAATTGTGAAGATTATAAGAGAATTCATGCACATTGCAGGGGATTTTGTTCCTTCAGATTTGATTCCAATAATTGGATGGTTCCCAATAGAAGGGAAAGTGCTGAAGAACATGAAACGAGTTGGAAAAGATATGGATAAAGTTGTGGGAAGCTGGGTTAAAGAGCATCAAGATATGAAGATTACTGATTTTGATGATAATGACACAAGTGAGAAACAAGATTTCATTGATGTTATGCTATCTGTTATTGAAGATGATCCTTCCTCTGGTTATACCCGGGACAATATCATCAAGGCCAATATTACGAATCTGATTCTAGCAGGGTCAGACACAAAATCGATTGCAATGACTTGGATCCTAGTGATGCTGTTGAGAAATAAACATGCTCTGAAACGTGCACAAGAAGAAATTGATCTTCATGTGGGTAAAAACAGAAAGGTAGAAGCATCAGATGTTAAAAACCTTGTTTATTTACAAGCAACTTTTAAAGAAACTCTAAGATTATATCCGCCAGGGCCTCTATTAGTACCTCATGAAGCAAGAGAAGATTGTTACATTCATGGCTTTTACGTGCCAAAAGGGACACGTGTCTTTGCTAATGTGTGGAAGCTGCATAGAGATGCAAGTATTTGGTCAGAGCCTGAGAGGTTTTCACCAGAGAGGTTCATTAATGGAAATAATGGAGAACTTGATGAAGATCATCATCATCATCATCACTTTGAATACCTTCCATTTGGATTAGGTAGAAGAGCTTGCCCTGGATCCACATTTGCCACACAAGTGACTCTCATGAAACTTGCTCGCTTGCTTCAAAGGTTTGATTTGGATGTAGGAATGGAGGATGAACCTATTGACATTAGAGAAGGCTTTGGCATAACCTTGCCCAAGTTGACTCCATTAACAATCTTATTGACCCAACGAGTTGATGCTAGCATATGA 990 0.3848 MVRYFNYLKNVDDKEANRIVKIIREFMHIAGDFVPSDLIPIIGWFPIEGKVLKNMKRVGKDMDKVVGSWVKEHQDMKITDFDDNDTSEKQDFIDVMLSVIEDDPSSGYTRDNIIKANITNLILAGSDTKSIAMTWILVMLLRNKHALKRAQEEIDLHVGKNRKVEASDVKNLVYLQATFKETLRLYPPGPLLVPHEAREDCYIHGFYVPKGTRVFANVWKLHRDASIWSEPERFSPERFINGNNGELDEDHHHHHHFEYLPFGLGRRACPGSTFATQVTLMKLARLLQRFDLDVGMEDEPIDIREGFGITLPKLTPLTILLTQRVDASI 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241975g00002 329 PRINTS E-class P450 group I signature 113 130 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241975g00002 329 PRINTS E-class P450 group I signature 269 292 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241975g00002 329 PRINTS E-class P450 group I signature 259 269 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241975g00002 329 PRINTS E-class P450 group I signature 217 241 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241975g00002 329 PRINTS E-class P450 group I signature 133 159 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241975g00002 329 PRINTS E-class P450 group I signature 176 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241975g00002 329 Pfam Cytochrome P450 11 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241975g00002 329 PANTHER CYTOCHROME P450 82C3-RELATED 4 327 - -
Stsc241975g00002 329 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 262 271 IPR017972 GO:0005506|GO:0016705
Stsc241975g00002 329 Gene3D Cytochrome P450 4 322 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241975g00002 329 PRINTS P450 superfamily signature 260 269 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241975g00002 329 PRINTS P450 superfamily signature 124 141 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241975g00002 329 PRINTS P450 superfamily signature 177 188 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241975g00002 329 SUPERFAMILY Cytochrome P450 9 324 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241975g00002 Stsc-Chr241975 1750 3337 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241975g00002 3 325 Cytochrome P450 AT4G31940 46.505 4.11e-96 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241975g00002 - - gmx:100790675 425.246