Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241974g00003 ATGCAATGTATAATTAAGGAGGATGTGATAGTTGATGAAAATCTGAAATTGATTGTGGATGACAAAACTATGGCGAGGGTGGTCCAGGATCCTGTGGAGGAGGAGGAGCCTAGGGAAGGCATGTGGTTTGGCACTCTTGTTGAAGCGCGAAAGTATTATTATGGCTATGCAGCAAAGATGGGTTTTGTTCCAAAAATAAGGAACACAAATTTTGAGAGGCACACCAAAGACAAGATACCTATAAGCCAAACCTTTCATTGCAACAAAGATGGCTATCGTGGATCTAAGAAAAAGCCACCCAAGAGAGCTAAAACAATTGCATTTGTAGGTTGCAAAGCACGTTGTTATGTAGCAATGGTCAGGGCAACAGGCCTATGGAAAATTTCAAGGTTAGAATTGAGTCACACACACCCTCTTAATCCAAAGCGATTAGGTATCCTGGAGAGTAGAAGTGTGATACAGAGCAATGATGAAACCGGTATACAACCAAACCAAACCTTTCTACCGTTGACGGGATCTAGTGAGAAAGAGGGATCTTTCTTGGCTACTCCTTTGGAAGAGCCATCATCATCATCACCCATTCATTCTCCTCCGGAAAAGAATAGAGAGATATGCAAGGATACTGAATCTTGTTGTGCTAGCAGAGTGGTGGCAGACCATGATTTTGGTTCCGTGTTAAGCAAGAATTTTGATGCAGGTGGTTTTATTGACCGGTACCTCTTAACTTCTTCAACTATGGAGGTGTTGGAAAAGGTTCCTAGTGATGAAAACATGAGTAGTATGCAACCAAGGCTTCTAAAATCTGCAGTCTTATGTCGTGACATGGAGAGAAAATTTTCGGACTTGCCCAAGTTGAAGATGAAACTTGCAGCTAAAGATAAAGAAATAGATTTTCTGAGTGTCAAAAATATTGAACTATACAATAAAACTATTGAATTGTCTTCTCAAGTGTCAAAGTAG 960 0.4052 MQCIIKEDVIVDENLKLIVDDKTMARVVQDPVEEEEPREGMWFGTLVEARKYYYGYAAKMGFVPKIRNTNFERHTKDKIPISQTFHCNKDGYRGSKKKPPKRAKTIAFVGCKARCYVAMVRATGLWKISRLELSHTHPLNPKRLGILESRSVIQSNDETGIQPNQTFLPLTGSSEKEGSFLATPLEEPSSSSPIHSPPEKNREICKDTESCCASRVVADHDFGSVLSKNFDAGGFIDRYLLTSSTMEVLEKVPSDENMSSMQPRLLKSAVLCRDMERKFSDLPKLKMKLAAKDKEIDFLSVKNIELYNKTIELSSQVSK 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241974g00003 319 MobiDBLite consensus disorder prediction 176 201 - -
Stsc241974g00003 319 Pfam FAR1 DNA-binding domain 51 141 IPR004330 -
Stsc241974g00003 319 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 29 173 - -
Stsc241974g00003 319 MobiDBLite consensus disorder prediction 176 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241974g00003 Stsc-Chr241974 4692 6416 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc241974g00003 FAR1 1.9e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241974g00003 - - adu:107459405 200.675