Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241973g00001 ATGGCTAAGACACTCATCTCCTCTCCCTCCTTCATCGGAACTCCACTCCCCTCCCTCCACCGCCACCGCTTCCCCCACCGCACTTCCAGGCTCAAAGTCAACTTCAGCCTCCACCAGATTCCACCAATCCACTCCCTCACCGACTCTTTCCGTTTCGATGAAGTCGTCGCCAGAGCCGAAGGCCTTCTCTACACGCTCGCCGACGCCGCTGTCGCCACGGCCGACTCTGCCGCCACCGCCACGGGGACTTCCACCGATGCAGCCGCCGGTACCGTGCAGAAGAACGGAGGCTGGTTCGGATTCATCTCCGAAGCCATGGAGTTTGTTCTCAAGGTGTTAAAGGATGGTCTTTCTGCTGTGCATGTGCCTTACTCATATGGATTTGCTATCATATTGCTCACGGTTGTGGTTAAGGCTGCTACACTTCCCTTGACAAAACAACAGGTTGAATCAACACTAGCTATGCAAAACCTTCAACCAAAAATAAAGGCCATTCAAGAAAGATATGCCGGCAATCAGGAAAGAATACAACTTGAGACATCCAGGTTATATAGGCAGGCTGGGGTGAACCCATTGGCAGGTTGTTTACCAACATTGGCTACAATTCCTGTATGGATTGGTCTTTACCAAGCTTTATCAAATGTTGCAAACGAGGGATTGTTAACAGAAGGTTTCTTTTGGATCCCCTCTCTTGGAGGTCCTACTACCATAGCTGCTAGACAAAGTGGAGCTGGAATTTCTTGGCTTTTCCCATTTGTGGATGGTCATCCACCATTGGGTTGGCCGGAAACTGCAGCATATCTTGTTTTACCTGTTCTTCTTGTTGTTTCTCAATACGTGTCCATGGAAGTCATGAAGCCACCTCAGACAAATGATCCTACCCAAAAGAATACACTTCTCATTTTCAAGTTTCTTCCGCTCATGATTGGTTACTTCTCTCTCTCTGTTCCATCAGGGCTAACAATTTACTGGTTTACAAACAATGTGCTGAGCACAGCTCAACAAGTATGGTTACGAAAATTAGGAGGTGCACAACCCGTTGTAGATGAAAATGCTGGTGGAATTATCACAGCAGGACGTGCCAAAAGATCAGCTTCCCAGCCAGCTAAAGCTGGTGAAAGATTTAGGCAGTTAAAAGAAGACGACAAAAAGAAAAAGTCAAACAAGGCACTCCCAGTTGAAGAAGTTCAACCTTTGGCATCTGCTTCTGATTCTGATGATGTTTCAGATGAAGAGAGTAACAAGGGATCGGAAGCTACAGAAGAAGCATATGCTTCTACAGTTGGCAAAGATTCTAGGGAGAGAAGGAGCAAGCGCTCGAAAAGGAAGCGGGCTGTATAA 1341 0.4735 MAKTLISSPSFIGTPLPSLHRHRFPHRTSRLKVNFSLHQIPPIHSLTDSFRFDEVVARAEGLLYTLADAAVATADSAATATGTSTDAAAGTVQKNGGWFGFISEAMEFVLKVLKDGLSAVHVPYSYGFAIILLTVVVKAATLPLTKQQVESTLAMQNLQPKIKAIQERYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGGPTTIAARQSGAGISWLFPFVDGHPPLGWPETAAYLVLPVLLVVSQYVSMEVMKPPQTNDPTQKNTLLIFKFLPLMIGYFSLSVPSGLTIYWFTNNVLSTAQQVWLRKLGGAQPVVDENAGGIITAGRAKRSASQPAKAGERFRQLKEDDKKKKSNKALPVEEVQPLASASDSDDVSDEESNKGSEATEEAYASTVGKDSRERRSKRSKRKRAV 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241973g00001 446 NCBIfam membrane protein insertase YidC 125 339 IPR028055 -
Stsc241973g00001 446 CDD 5TM_YidC_Alb3 127 340 IPR047196 -
Stsc241973g00001 446 Pfam 60Kd inner membrane protein 126 340 IPR028055 -
Stsc241973g00001 446 MobiDBLite consensus disorder prediction 367 391 - -
Stsc241973g00001 446 PANTHER OXA1 65 384 IPR001708 GO:0016020|GO:0032977
Stsc241973g00001 446 MobiDBLite consensus disorder prediction 359 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241973g00001 Stsc-Chr241973 5349 10414 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241973g00001 28 396 Chloroplast and Mitochondria Gene Families AT2G28800 70.461 0.0 523