Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241965g00001 TTGTGTGAGTATGCTAAACAAGTTGGATTTGCTACTAAAATCAGAAATTCACAGAGGAATAAAGACATCGGTGCAATCAAGAATCAACTCCTCACATGTAATAAAGAGAGGAAAATGACATCTGATATACCTGAAGCTGAGAAGACCAATAAAATTTCTTCGGCAAACTGTCCTGCAAGAATTTTTGTCCACATTCAGAAGAAGACTCAACTTTTTGTTATTTCCAAGGTTGTTTTGGAGCATTCACATCTTTATTCTGCTAATCTGGTTGAAATGTTACCACAACTCAGAGATCTCAGTATGTACGTTCGCCAAATCATTGAGAATAACGATCAGGCTTGTATTAGACCTAGCAAGACTTATTCGTCACTTATTACAGCAGCTGGTGGTCATCATGCACTGAGTTACATTGAGAAAGATGTCAGAAATTACATTACGAGGGAGGTTTGTAATATTTCGGAAGAAGATGCGAAAGAAGCAATGTTCAGTTCAATGAAGAAGAATTTTCTGTTCAATGTGATTAGTTATTGA 531 0.3635 LCEYAKQVGFATKIRNSQRNKDIGAIKNQLLTCNKERKMTSDIPEAEKTNKISSANCPARIFVHIQKKTQLFVISKVVLEHSHLYSANLVEMLPQLRDLSMYVRQIIENNDQACIRPSKTYSSLITAAGGHHALSYIEKDVRNYITREVCNISEEDAKEAMFSSMKKNFLFNVISY 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241965g00001 176 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 2 139 - -
Stsc241965g00001 176 Pfam FAR1 DNA-binding domain 2 83 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241965g00001 Stsc-Chr241965 627 1235 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc241965g00001 FAR1 1.3e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241965g00001 - - aip:110271906 172.94