Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241964g00004 ATGCTGAATGTGCCAGTTATGTATATCATTGGAGCATTTATTCCTGCAACAATGATTGCTGTGCTTTATTATTTTGACCATAGTGTGGCATCTCAGCTTGCTCAGCAGAAAGAATTCAATTTAAGAAAGCCACCTTCTTTCCATTATGATTTACTTCTTTTGGGATTCATGGTTATATTATGTGGTCTAATTGGAATTCCCCCATCAAATGGTGTGATTCCACAATCTCCAATGCATACCAAAAGCTTAGCTACACTAAAGCACCAGTTACTCAGAAACCGGCTTGTTGCAACGGCTCGAAGTTGTATGAGTAAGAAGTCAAGCTTGGGACAACTATATGGAAGCATGCAAGAAGCTTACCAGCAGATGCAAACGCCTCTCGTCCACCAGGAACCTTCTCGAGGTTTAAAAGAGTTGAAAGAGTCAACTTTTCAATTGGCATCAAGCATGGAGAGTATGAATGCTACAATTGATGAGTCAGTATTTGATCTCGAGAAGGAACTCGATGACATATTACCTATCGAGGTTAAAGAACAACGAGTGAGCAACTTGCTCCAATCTTTGATGGTTGGAGGGTGCATAGCAGCAATGCCAGTCCTGAAAATGATTCCAACTTCTGTGCTCTGGGGCTATTTCGCTTTCATGGCAATCGAAAACTTACCCGGGAACCAGTTCTGGGAACGAGTCTTACTCATTTTCACGGCTCCAAGCAAAAGATACAAAGTTCTGGAGGAGTGCCATACAACTTACATTGAAACCGTACCTTTCACGAGAATTGCAGCATTTACAATCTTCCAGAGTGTCTACTTGATTGCATGTTTTGGTATCACATGGATTCCAATTGCTGGGGTTCTGTTCCCGCTTATGATCATGCTTCTTGTTCCCGTAAGACAATACATTCTGCCCAAGTTTTTCAAAGCGGAGCACCTCCAAGATTTAGATGCCGCAGAGTATGAAGAAGTACCCGCCATGCCATTCGACCAAGCCACAGAGGGAGAGTTGGGCAAGACAGCTTCCTTTGCGGACGACGGAGAGATTCTCGACGGCATAATTACTCGAAGCCGGGGCGAGGTAAGGTGCGTTTGTAGCCCAAAGGCAAGGAGCTCCACTCCACCAGCCAGAGTTTTTCCAAGTTTTCAGAGAAGTTCAAGCTTCCCAGATAGAGTATACAGCCCTCGGATAAGAGAATTAAGAGGAAATCACAGTCCTCAAGGTGTTGGAAAAGGACCATTTAGTCCTGCAGAAGCAAGGCCATCCAATCTGAGTAACGGTGGTTGA 1278 0.4421 MLNVPVMYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPPSFHYDLLLLGFMVILCGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRNRLVATARSCMSKKSSLGQLYGSMQEAYQQMQTPLVHQEPSRGLKELKESTFQLASSMESMNATIDESVFDLEKELDDILPIEVKEQRVSNLLQSLMVGGCIAAMPVLKMIPTSVLWGYFAFMAIENLPGNQFWERVLLIFTAPSKRYKVLEECHTTYIETVPFTRIAAFTIFQSVYLIACFGITWIPIAGVLFPLMIMLLVPVRQYILPKFFKAEHLQDLDAAEYEEVPAMPFDQATEGELGKTASFADDGEILDGIITRSRGEVRCVCSPKARSSTPPARVFPSFQRSSSFPDRVYSPRIRELRGNHSPQGVGKGPFSPAEARPSNLSNGG 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241964g00004 425 Pfam HCO3- transporter family 3 88 IPR011531 GO:0006820|GO:0016020
Stsc241964g00004 425 Pfam HCO3- transporter family 174 264 IPR011531 GO:0006820|GO:0016020
Stsc241964g00004 425 MobiDBLite consensus disorder prediction 373 387 - -
Stsc241964g00004 425 PANTHER ANION EXCHANGE PROTEIN 1 322 IPR003020 GO:0005452|GO:0006820|GO:0016020
Stsc241964g00004 425 MobiDBLite consensus disorder prediction 366 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241964g00004 Stsc-Chr241964 25173 27228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241964g00004 1 409 Antiporters AT3G62270 71.463 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241964g00004 K24194 - gmx:100795777 702.205