Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241962g00006 ATGATCGCATTGAAGGTGATGACTCGGGACTCCATCCAAGCTTCCCTTGAATTTAAGAAGGAAATTGAGATGCTATGTCAGCTTCATCACCCTAACTTGATATCTCTTATAGGCTTCTGCAACCAAGAAAAGGAAAAGATTGGTGTGTACGAGTACATGGCCAATGGATCACTCAGTGATTACTTGAGTAATAGGAACAACAAACCACTTTCATGGAACAAGAGACTAGAGATCTGCATTGGAGTAGCAAGTGCTCTACACTACCTTCACTCAGGAGCCAAGCGTAGTATATTCCATCGTGATATAAATCCAAATCACACTCTTGAGGAGACAATGGATCCAACTCTGAAAGGAAAGGTTGCAGCTGAGAGTTGGCAAGTATTTAGCAATGTGATACAAAGTTGCTTGGAGTATGAAGCAGAAGAGCGACCTACAATGGGTGAAGTAGAGGTATTGCTTGAGCATGCTCTCTCATTGCAGCAACAAGCTCATATTATAAACAATGCTACTCATTGTTATACCTTATCATCCACTACCCCTTGTTTGAATTTTCGAGAGCACTACAATGATCATGCTTTAGGACTACAAGAGTCAAGAGGAAGCAAATGGCATTACTAG 618 0.4126 MIALKVMTRDSIQASLEFKKEIEMLCQLHHPNLISLIGFCNQEKEKIGVYEYMANGSLSDYLSNRNNKPLSWNKRLEICIGVASALHYLHSGAKRSIFHRDINPNHTLEETMDPTLKGKVAAESWQVFSNVIQSCLEYEAEERPTMGEVEVLLEHALSLQQQAHIINNATHCYTLSSTTPCLNFREHYNDHALGLQESRGSKWHY 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241962g00006 205 Gene3D Transferase(Phosphotransferase) domain 1 107 177 - -
Stsc241962g00006 205 Gene3D Transferase(Phosphotransferase) domain 1 54 106 - -
Stsc241962g00006 205 PANTHER OS07G0166700 PROTEIN 105 160 IPR045272 GO:0004714|GO:0006468
Stsc241962g00006 205 Pfam Protein tyrosine and serine/threonine kinase 2 103 IPR001245 GO:0004672|GO:0006468
Stsc241962g00006 205 SUPERFAMILY Protein kinase-like (PK-like) 2 149 IPR011009 -
Stsc241962g00006 205 ProSiteProfiles Protein kinase domain profile. 1 205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241962g00006 205 Gene3D Phosphorylase Kinase; domain 1 1 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241962g00006 Stsc-Chr241962 54089 55132 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241962g00006 2 121 Receptor kinase-like Gene Family AT2G39360 47.934 4.55e-32 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Stsc241962g00006 PK_Tyr_Ser-Thr 1.1e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241962g00006 - - aip:107637356 206.453