Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241958g00007 ATGTTACGTTCACTTTGGTATTCTATGACCCAATATGTTTTCTTTCTTCTCTTCATCACTTCATACTCATCACTTGCAAGTAATGAAACTGATTTAGTTGCATTGCTCAAATTCAAGGAATCCATAACCAACGACCCTTCCCAAGTGTTGATCTCTTGGAACACTTCTAGTAACCACTTTTGCAACTGGCACGGTGTCACATGCGACGTTCGCGGTCGTCGGAACCAAAGAGTCACCGGGCTAGACTTACAAGGCTCTCACTTGCACGGCCTCATATCATCATATGTTGGGAACCTCTCCTTTCTTAGACTCTTGAATTTGGGTGGCAATAGCTTCTATGGGCATGTCCCACAAGAACTTGGTCGTTTGTCCCAATTGCAAACACTTTTCTTAACCAACAACACCTTAGAAGGGGAGTTTCCAAAGAACTTGACAAATTGTTTTGAGTTAAGGCTCTTGAATCTACAAAACAATCATTTCATTGGCCAAATTCCAATGGAGATTGGCTCCCTCACAAAGCTTGAAGGACTTCATGTTGATAAAAACAATCTAACCGGAAAAATCCCGGATTCGATTGCGAATATTTCTTCCCTTTCTGTCCTCTCCATGGCTTATAACAATTTGGAGGGAAACATACCCGACTCAATTGCCAAACTGAAAGTCCTAACGAAGTTGCAAGTTGGAGTCAATAACCTCTCTGGTACATTTCCCTCTGCAATTTATAATTTATCTTCTCTCACTTTTTTATCGATTGCGGTGAATCGATATACTGGTTTTCTTTTACCCGATATGTTCGTCACTCTTTCTAATATCAAGACAATGTATTTTGGCGGGAATCAATTTTCCGGCCAAATCCCGAGTTCCATCTCAAATGCATCCAAAATCCAAGTGTTAGATATTTATGTAAACCATTTTAGTGGAGAAATCCCACAACTAGGGAAGCTACAAGATCTCTCTCTAGTGAAGTTAGGTGAAAATAACTTCTCTGGCAATCTAGCTGACAAAATAGATGGTGAGTTCTTAAGAAGTTTGATTAATTGCACCAAACTTTTGATGTTAGATATAGATACCAATAATTTTAGTGGTAACTTACCTAGTTTCATGGGTAATTTGTCCACATCACTCACAAGTGTGTATCTTGGTGGGAATCAAATTCATGGACAAATTCCTAAGGAATTAGGGAATCTAGTCAACTTGATTTTGTTGACCATGGAAAGCAACCACTTAACAGGAACCATTCCAACAAGTTTTAGCAAGCTCACAAAGATGCAGTTGGGATTGGGAAGTAACATGTTGTCTGGGAATATTCCTTCAACTCTTGCTAATTGCAAGAACTTACAACGATTAGATCTTTCTTATAACAACCTTAGTGGACATATACCTTCATCACTTATGGGACTTTCCTCTTTGTTAATCCTAAATGTGTCACATAACTCTTTAAGTGGTAACCTTCCTGTTGAGGTTGGCAGGCTTAGTAATCTTGGGGTGTTAGATTTGTCTAAGAATTTTCTCTTCGGTTCGATCCCCGAATCGATCGGAAAATGTGTGAGCTTGGAGATCCTTGATTTGCATGGTAATTCCTTCAATGGAAGCATACCACCTTCTTTGGCTTCATTGAAAGTTCTTCAAGTATTAGACTTGTCGCGAAACGAATTGTCCGGAACAATTCCACAAGAACTGCAAAACCTTACTTCCTTACAACACTTGAATGCATCTTTTAACATGTTGGAAGGTGAAGTTCCCAAAAATGGTGTTTTCCAAAACACAAGTGCATTTTCAGTGGCCAACAATAGCAACCTTTGTGGTGGAGTATCAGAACTCAAGCTTCCACCATGCCGCGAATTAAAGGATTCGAGCAAGCGAAAAGACAACAATTTGAAGATCATTGTTGGGTTAACAACTTCTTTGATTGCAATATTTCTTCTCTTGTCATGTTTCTATGTTATCTACAAAAAGAAGAAACAGAGAAAACAGAGAAGAGAAGAACCAAGCAATTATTCGGCATTTAACGAACTCCCTAAGGTATCTTACAAAGATCTTCACCATGCCACTGATGGTTTCTCAAAGAGGAACTTGATTGGTGTTGGGAGTTTTGGTTCCGTGTATAAAGGAATCCTTGAATCTGATTTGGTGGCCATAAAAGTTTTGAATCTTGAAAGGAAAGGAGCTAATAAAGCCTTTGTTGCAGAATGCAATGCATTAAGGAATATTCGACATAGGAATCTAGTGAAGATTCTCACATGTTGCACTAGTGTGGATCACAATGGGAATGACTTCAAAGCTTTAGTTCTTGAGTTCATGTCAAACAGAAGCTTAGAAGAATGGCTCCATGGAGACACTACAAGTGGTTTATTAGAAGAGCTTAGACCATTGAATCTGAAGGAGAGATTAGATATTATTAATGGGGTTGCCTCTGCCATGAATTATCTTCATTATGAATGTGTGGAACCAATTATTCACTGTGATTTGAAGCCGAGTAATGTCCTTCTTGATAAGGACATGGTTGCTCATGTGAGTGATTTTGGGTTGGCAAGAATTGTTTCAGCAATTCATGGCAACACACATGATCAAACTAGCACAATTGGCATAAAGGGAACTATAGGTTATGCTCCTCCAGGTGAACTTTCACATAAATGGATCTATTTGAAACCAATTTCAGAGTATGGAATAACTTCTAGAGTATCCAAAGAAGGTGATACATATAGCTTTGGGATTATGCTTTTGGAGATGTTGACAGGAAGAAGACCAACAGAAGAGATATTCAAAGATGGGAACAACTTGCACAGCTATGTTCAAAATGCATTCCCAAACAACTTTTTGGAGATAGTTGATGCCTCTCTTCTCCATAATTTTCAAAATCTTGATGCCAACAAGTGCTTGTTTTCACTCTTTAAGATTGGACTAGCTTGTTCTTTAGAATCCCCTGAAGAAAGAATGAATATGCTAGAAGTCACAAGACAGCTAAGTTTAATCCATGCTACTTACTACTAA 2991 0.3855 MLRSLWYSMTQYVFFLLFITSYSSLASNETDLVALLKFKESITNDPSQVLISWNTSSNHFCNWHGVTCDVRGRRNQRVTGLDLQGSHLHGLISSYVGNLSFLRLLNLGGNSFYGHVPQELGRLSQLQTLFLTNNTLEGEFPKNLTNCFELRLLNLQNNHFIGQIPMEIGSLTKLEGLHVDKNNLTGKIPDSIANISSLSVLSMAYNNLEGNIPDSIAKLKVLTKLQVGVNNLSGTFPSAIYNLSSLTFLSIAVNRYTGFLLPDMFVTLSNIKTMYFGGNQFSGQIPSSISNASKIQVLDIYVNHFSGEIPQLGKLQDLSLVKLGENNFSGNLADKIDGEFLRSLINCTKLLMLDIDTNNFSGNLPSFMGNLSTSLTSVYLGGNQIHGQIPKELGNLVNLILLTMESNHLTGTIPTSFSKLTKMQLGLGSNMLSGNIPSTLANCKNLQRLDLSYNNLSGHIPSSLMGLSSLLILNVSHNSLSGNLPVEVGRLSNLGVLDLSKNFLFGSIPESIGKCVSLEILDLHGNSFNGSIPPSLASLKVLQVLDLSRNELSGTIPQELQNLTSLQHLNASFNMLEGEVPKNGVFQNTSAFSVANNSNLCGGVSELKLPPCRELKDSSKRKDNNLKIIVGLTTSLIAIFLLLSCFYVIYKKKKQRKQRREEPSNYSAFNELPKVSYKDLHHATDGFSKRNLIGVGSFGSVYKGILESDLVAIKVLNLERKGANKAFVAECNALRNIRHRNLVKILTCCTSVDHNGNDFKALVLEFMSNRSLEEWLHGDTTSGLLEELRPLNLKERLDIINGVASAMNYLHYECVEPIIHCDLKPSNVLLDKDMVAHVSDFGLARIVSAIHGNTHDQTSTIGIKGTIGYAPPGELSHKWIYLKPISEYGITSRVSKEGDTYSFGIMLLEMLTGRRPTEEIFKDGNNLHSYVQNAFPNNFLEIVDASLLHNFQNLDANKCLFSLFKIGLACSLESPEERMNMLEVTRQLSLIHATYY 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241958g00007 996 Pfam Leucine rich repeat 535 576 IPR001611 GO:0005515
Stsc241958g00007 996 Pfam Leucine rich repeat 424 480 IPR001611 GO:0005515
Stsc241958g00007 996 Gene3D Transferase(Phosphotransferase) domain 1 767 995 - -
Stsc241958g00007 996 Gene3D Ribonuclease Inhibitor 28 191 IPR032675 -
Stsc241958g00007 996 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 193 283 - -
Stsc241958g00007 996 ProSitePatterns Protein kinases ATP-binding region signature. 693 714 IPR017441 GO:0005524
Stsc241958g00007 996 SUPERFAMILY L domain-like 28 332 - -
Stsc241958g00007 996 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 333 616 - -
Stsc241958g00007 996 PANTHER RECEPTOR-LIKE PROTEIN 55 348 991 - -
Stsc241958g00007 996 Pfam Protein kinase domain 688 927 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241958g00007 996 Pfam Leucine rich repeat N-terminal domain 29 69 IPR013210 -
Stsc241958g00007 996 SUPERFAMILY RNI-like 254 581 - -
Stsc241958g00007 996 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 28 192 - -
Stsc241958g00007 996 Gene3D Phosphorylase Kinase; domain 1 668 766 - -
Stsc241958g00007 996 SMART serkin_6 687 995 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241958g00007 996 ProSitePatterns Serine/Threonine protein kinases active-site signature. 818 830 IPR008271 GO:0004672|GO:0006468
Stsc241958g00007 996 FunFam LRR receptor-like serine/threonine-protein kinase EFR 657 766 - -
Stsc241958g00007 996 PRINTS Leucine-rich repeat signature 539 552 - -
Stsc241958g00007 996 PRINTS Leucine-rich repeat signature 446 459 - -
Stsc241958g00007 996 SMART LRR_typ_2 563 588 IPR003591 -
Stsc241958g00007 996 SMART LRR_typ_2 539 562 IPR003591 -
Stsc241958g00007 996 SMART LRR_typ_2 491 515 IPR003591 -
Stsc241958g00007 996 SMART LRR_typ_2 443 467 IPR003591 -
Stsc241958g00007 996 SMART LRR_typ_2 99 123 IPR003591 -
Stsc241958g00007 996 SMART LRR_typ_2 396 419 IPR003591 -
Stsc241958g00007 996 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 767 996 - -
Stsc241958g00007 996 SUPERFAMILY Protein kinase-like (PK-like) 661 989 IPR011009 -
Stsc241958g00007 996 ProSiteProfiles Protein kinase domain profile. 687 995 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241958g00007 996 Gene3D Ribonuclease Inhibitor 197 336 IPR032675 -
Stsc241958g00007 996 Gene3D Ribonuclease Inhibitor 337 614 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241958g00007 Stsc-Chr241958 36013 40218 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241958g00007 27 996 Receptor kinase-like Gene Family AT3G47570 43.383 0.0 766
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Stsc241958g00007 Pkinase 1e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241958g00007 - - aprc:113870110 1024.62