Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241955g00011 ATGAGGTTTATCTTTCAAGCAATTCCTTCTCATCCTCCTCAATTGGCTCTAGTCATTCTTCTTATTTCATGTTCTGTCACAGCTATGACATGTCAAAAACAGAATCTACCAAACAATGAAAAAGTCCCAGCAATCTTTGTGTTTGGGGACTCAATAGTGGACACAGGTAACAACAACTACATCACAACCATTGCCAAATGCAATTTCCCACCATATGGTAGAGACTTTGCTGCTGGAGGATATCAACCCTCAGGGAGGTTCAGCAATGGTTTAGTCCCTTCAGACTTCATTGCTGAAATATTTGGAGTCAAAAATATTTTGCCACCTTATCTGGACCCAAATCTGCAACTCCAAGAACTTCTCACAGGTGTAAGCTTTGCCTCAGGAGGCGCCGGATATGATCCTCTTACCTCGAAAATTGCGGGTGCATTGTCACTGTCAGATCAATTAGGGAAATTGAGGGAGTACAAAAAGAAGATAAGGGAAGCAGTTGGAGAGAACAGAACAGAAAGAATAATATCAAAGAGCATATACATAGTGTGCCTGGGAAGTGATGACATTGCTAACACTTACACTCCATTTAGAAGATCAGAGTATGATATTCCATCTTACACAGACTTAATGGCCTCACAAGCCTTCAACTTCTTAAAGGAGCTTTATGGGGTAGGAGGTAGGAGGATTGGAGTAGTGAGTATGCCAATTATAGGGTGCGTGCCGTCACAGAGAACAACCGGTGGAGGCATAGAGAGAGCATGTTCAGATTCTGAAAATGAAGCAGCAATTCTATTCAACATGAAACTCCTCTCTCAAATCAAGATCCTCAATAAACAGTTTCCAGATGCTAGGATCGTCTACCTCGATATTTACAACATATTAGATCAGATGATTCAAAACCCAGCTAAATATGGTAATTAA 915 0.4087 MRFIFQAIPSHPPQLALVILLISCSVTAMTCQKQNLPNNEKVPAIFVFGDSIVDTGNNNYITTIAKCNFPPYGRDFAAGGYQPSGRFSNGLVPSDFIAEIFGVKNILPPYLDPNLQLQELLTGVSFASGGAGYDPLTSKIAGALSLSDQLGKLREYKKKIREAVGENRTERIISKSIYIVCLGSDDIANTYTPFRRSEYDIPSYTDLMASQAFNFLKELYGVGGRRIGVVSMPIIGCVPSQRTTGGGIERACSDSENEAAILFNMKLLSQIKILNKQFPDARIVYLDIYNILDQMIQNPAKYGN 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241955g00011 304 Gene3D SGNH hydrolase 30 304 IPR036514 -
Stsc241955g00011 304 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Stsc241955g00011 304 CDD SGNH_plant_lipase_like 43 303 IPR035669 -
Stsc241955g00011 304 PANTHER GDSL ESTERASE/LIPASE EXL3 22 303 - -
Stsc241955g00011 304 Pfam GDSL-like Lipase/Acylhydrolase 45 298 IPR001087 GO:0016788
Stsc241955g00011 304 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 45 56 IPR008265 GO:0006629|GO:0016298
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241955g00011 Stsc-Chr241955 37644 38873 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241955g00011 39 303 Pollen Coat Proteome AT1G75910 40.000 4.13e-56 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241955g00011 - - gmx:102668883 403.29