Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241952g00009 ATGCAAGCCTCGCAGAAACACTCAACCTCAGCTGGTATTCACATATACCACCACCAGCCAGTGCAAGGCATTGACCCTTACAATCATTACCAAATATTACAAAGCAATTCATGCCATGATATCCATGACAGTAGCAGCCAGGGGACCAATGTGTCATTTGAAGCCTCCAAGGAGCAATACTATACCCTTGATTCATCCCCAGCAACCAATGGTCTCATAGGTTGTGATTCACCTTCCTGTGCTAGTGTATCATCCAATAGGAGCCCTTTCTCTCCACAGAATTCTCAGTCATACTACTCAGATCAGCACCAGTCTTCTGACAACACCTATGGATCACCGATAAGCGGATACTCAAGTGCTGAAGATAGCTATGAATTGAAGAACAAGCTAAGAGAATTGGAGATTACATTGTTGGGGCCAGAACCAGATATTGCTGATAGTTGTCACTGCTGCTTCAAGGGTGTTCAACAAGGAGCATCTCCAATGTCCAAGTACAATTGGGCTCAGATTGCTGAGATGATTCCAAAGTTGGACCTGAGAGAAGTCCTTATTCTCTGTGCACAAGCTGTGGCGGATGATGACATTCAAACAGCACTAGGGTGGATGGATAATGTGTTGGTGAAGATGGTATCGGTTGCTGGGGATCCGATACAGAGGCTAGGTGCATACATGTTGGAAGGTCTTAGAGCAAGGTTTGAATCATCAGGGAGCTTAATTTACAAGGCATTGAAGTGTGAACAACCAACAAGCAAGGATCTAATGACTTATATGCATGTCTTGTACCAGATTTGCCCATATTGGAAATTTGCTTACATATCTGCAAATGTTGTCATTGGAGAAGCAATGCAGAATGAAGCAAGGATTCACATAATTGACTTCCAAATTGCACAAGGCACACAGTGGTTCTTGCTCATCCAGGCTCTTGCTCGTCGGCCGGGTGGACCGCCGTTCGTCCGTGTCACCGGTGTTGATGATTCCCAATCAAATCATGCCAGGGGTGGAGGACTTCACATTGTGGGGAAAAAGCTCTCAGAATATGCTAATTCTCTTGGGGTGCCCTTCGAGTTTCACAGTGCTGCAATGTGTGGATCAGAGGTTGAGCTAGAGAACCTTGTGATTCGGCCCGGGGAAGCTCTTGCTGTGAACTTCCCTTATGTTCTACACCACATGCCAGATGAGAGTGTAAGCACTGAGAATCACAGGGACAGACTATTGAGGTTGGTGAAGAGCTTGTCACCAAAGGTTGTTACCCTTGTTGAGCAAGAATCCAACACCAACACCTCACCCTTTTTCCAAAGATTTGTTGAGACTCTTAATTACTACTCTGCCATGTTTGAATCCATCGATGTGGCTCGTCCCAGGGACGATAAGCAGAGGATCAGCGCAGAACAGCACTGCGTGGCTCGGGACATTGTCAACATGATAGCTTGTGAAGGCCCTGAGAGGGTGGAAAGGCATGAGCTTCAAGGAAAATGGAGGTCAAGATTTTCCATGGCTGGTTTTGCACCTTGCCCTATGAGTTCTTCAGTCATGGCTGCAGTTAGAAGTCTCTTGAGCGAGTTCAATGAGAATTATAGGGTTGAAGAAAGAGATGGTGCTTTATACCTAGGATGGAAGAATAGAGCTATGGCCACTTCTTCAGCATGGACATGCTACTGA 1659 0.4593 MQASQKHSTSAGIHIYHHQPVQGIDPYNHYQILQSNSCHDIHDSSSQGTNVSFEASKEQYYTLDSSPATNGLIGCDSPSCASVSSNRSPFSPQNSQSYYSDQHQSSDNTYGSPISGYSSAEDSYELKNKLRELEITLLGPEPDIADSCHCCFKGVQQGASPMSKYNWAQIAEMIPKLDLREVLILCAQAVADDDIQTALGWMDNVLVKMVSVAGDPIQRLGAYMLEGLRARFESSGSLIYKALKCEQPTSKDLMTYMHVLYQICPYWKFAYISANVVIGEAMQNEARIHIIDFQIAQGTQWFLLIQALARRPGGPPFVRVTGVDDSQSNHARGGGLHIVGKKLSEYANSLGVPFEFHSAAMCGSEVELENLVIRPGEALAVNFPYVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESNTNTSPFFQRFVETLNYYSAMFESIDVARPRDDKQRISAEQHCVARDIVNMIACEGPERVERHELQGKWRSRFSMAGFAPCPMSSSVMAAVRSLLSEFNENYRVEERDGALYLGWKNRAMATSSAWTCY 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241952g00009 552 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 117 543 IPR005202 -
Stsc241952g00009 552 ProSiteProfiles GRAS family profile. 170 550 IPR005202 -
Stsc241952g00009 552 Pfam GRAS domain family 179 550 IPR005202 -
Stsc241952g00009 552 MobiDBLite consensus disorder prediction 84 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241952g00009 Stsc-Chr241952 42537 46241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241952g00009 1 549 GRAS Transcription Factor Family AT4G17230 58.909 0.0 639
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Stsc241952g00009 GRAS 7.3e-127 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241952g00009 - - gmx:100819190 947.577