Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241947g00006 ATGGGATACACTTCACTGCTTAGAAGTCCAAAGAAAGAGGAAGAACAACAAGTGCCTCAAGTTACTTACTCCTCCTCCTCCTCCACCATATTACCCTTTTCCAATAACCAACAATTACCATACCATAATGATGATGAAGAATTCAGTATCTTGGAGGAACTTGAAGGAGTCTTGGACATTGAAGAAGAAGAAGAGGAAGAACAAAAGATGTTACCATCACCATACCAGGGAATGGTAAATAGTTGTGGTAGTGGTGATGATGAAGAACTTCACTGGGATTTCATGGAATGGGAGGAGGATCATCATCAGTTCCCAGAAGCAGAAGAATTGAAAGTTGTAGTAAGAGATGATGATAACAGAATAATAAGCAATAATAGCAAATGCCTAATGGAGGAGGAGGAGAAGCAGAAGAAGATGGTAATAAAGATGGAAGAAGAAGAAGAAAGTAACAACAATAATGTTGTTGGGTTTTGGGAAGTTGAAGATGAGAAGATGGTGGCTTTGAATTTGAATTTGAACTATCAAGAGGTTTTGGATGCTTGGTCTGACCGTGGCTCTCTTTGGGCTGATGACTATTCTCTTTCATTGGCAGCCACCAATAATGGCTACTACTATATGGGAGAAGTGCCAGTATTAGAAGAAGAGAGAACAAGAAGGGAAGCAAGTGTTCTAAGGTACAAAGAGAAGCGCCAGAACAGATTGTTCTCCAAGAAGATAAGATACCAAGTTCGGAAACTAAACGCAGATAAGAGACCAAGAATCAAGGGTCGCTTTGTGAAGAGACACTGA 789 0.4018 MGYTSLLRSPKKEEEQQVPQVTYSSSSSTILPFSNNQQLPYHNDDEEFSILEELEGVLDIEEEEEEEQKMLPSPYQGMVNSCGSGDDEELHWDFMEWEEDHHQFPEAEELKVVVRDDDNRIISNNSKCLMEEEEKQKKMVIKMEEEEESNNNNVVGFWEVEDEKMVALNLNLNYQEVLDAWSDRGSLWADDYSLSLAATNNGYYYMGEVPVLEEERTRREASVLRYKEKRQNRLFSKKIRYQVRKLNADKRPRIKGRFVKRH 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241947g00006 262 Coils Coil 129 149 - -
Stsc241947g00006 262 MobiDBLite consensus disorder prediction 16 43 - -
Stsc241947g00006 262 Pfam CCT motif 219 261 IPR010402 GO:0005515
Stsc241947g00006 262 MobiDBLite consensus disorder prediction 1 43 - -
Stsc241947g00006 262 Coils Coil 51 71 - -
Stsc241947g00006 262 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 8 261 - -
Stsc241947g00006 262 ProSiteProfiles CCT domain profile. 219 261 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241947g00006 Stsc-Chr241947 52503 54081 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241947g00006 129 261 C2C2-CO-like Transcription Factor Family AT1G25440 39.333 1.77e-21 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Stsc241947g00006 CCT 2.9e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241947g00006 - - aip:107608058 377.096