Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241938g00001 ATGAGAATACCGAACCTTATCCTCTCTTATTCCCTTCCTCCTCTTCTTCTTCTTCTTGCATCTGGACTGCACTGGCCCTGCTGTGCTGCAAAACAGTCTTATGTAGTGTACATGGGAGCCCACTCACATGACCCTGCAAAATTGTCTCCTCTTGATTTCAATCGTGTGACACACTCCCACTATGAGTTTCTTGGATCTTTCTTGGGAAGTTCTGACGCAGCCAAAGATTCTATCTTTTACTCTTACACAAAGCACATAAATGGCTTTGCTGCAACCTTGGAAGAAGAAGTAGCAGCTGAGATTGCGAAGCATCCGAAAGTATTGTCGGTGTTCGAGAATAGAGGGAGGAAGCTACACACAACTCGATCATGGGATTTCATGGGGCTCGAGCAAAATGGAAAAACCCCATCAAACTCAATATGGAAGAAAGCAAGATATGGTGAAGGTGTTATCATTGGGAACCTGGATACAGGCGTTTGGCCTGAATCTAAGAGCTTTAACGACAAAGGCTTTGGACCAATTCCATCTAAGTGGAGAGGAATCTGTCACAATGGATCTGATCCCACCTTTCACTGCAACAGGAAGTTGATCGGGGCAAGGTACTTCAACAAAGGATATGCTTCAGTTGTAGGCAAACTGAACTCCTCATTGGAGTCACCTCGAGACACCGAAGGGCATGGGTCCCACACCCTCTCAACAGCTGGTGGTAACATGGTTCCAGGAGTCAGTGTCTTTGGCCAAGGCTGTGGCACGGCAAAGGGTGGCTCCCCAAAGGCACGTGTCGCGGCATACAAGGTTTGCTGGCCCCCTGTTGCCGGCAACGAGTGCTTCGATGCCGACATCATGGCGGCCTTCGACGTGGCCATCCACGACGGCGTGGACGTCTTGTCGGTGTCGCTTGGTGGGTCTGCAGCAGCTTTTTTCAATGACAGCGTTGCGATTGGGTCGTTCCATGCAGCTAAGCATGGGATAGTGGTAGTTTGCTCTGCTGGGAATAGTGGGCCTGCTGAAGGTTCTGCTGAGAATCTTGCGCCTTGGTATATTACGGTTGGTGCCAGCACAATGGATAGGGAGTTCCCCAGTTATGTTGTCCTTGGCAACAACCTCAGCCTCAAGGGTGAAAGTTTATCAGCTGCCAAATTGGCGCACAAGTTTTACCCAATCATTAAAGCTACAGATGCTAAACTGCCCAGTGCAAGAGTTGAAGATGCTGTGTTGTGCCAGAATGGAACACTAGATCCCAAGAAGGTGAAGGGGAAGATCTTGTTGTGCCTCCGCGGGGTTAATGCAAGAGTGGACAAGGGAGAGCAAGCTCTTCTAGCAGGTGCAGTGGGAATGGTTCTTGCCAATGATAAGATCAATGGGAATGAAATATTAGCCGATCCTCATGTCCTTGCTGCCTCTCAAGTCAATTTCACTGATGGTGTTTCTGTATTTGATTACATCAACTCCACCAAGTTCCCAGTGGCTTACATTACACATCCAAAGACTTTGATACATACTAAGCCAGCTCCTTTCATGGCAGCATTCTCATCAAAAGGGCCAAATATCATTGTTCCAGAGATCCTAAAGCCTGATATCACTGCACCAGGTGTGTCAGTTATAGCAGCTTACACGGAAGACGAAGGGCCAACTAATCAAATGTTTGACAAACGTAGAATTCCCTATAACTCAGTCTCAGGCACATCCATGTCTTGCCCTCACATTTCAGGCGTTGTCGGATTGTTGAAAACGATGTATCCGTCTTGGAGTCCGGCGGCTATTAAGTCTGCAATCATGACCACAGCTACAACACTAGATAATGAGGCAGAGCAACTTCTAAATGCTACTAATGGGAAGGCAACACCATTTGGTTATGGGGCAGGCCACGTTGAGCCAAACAGGGCAATGGATCCTGGCCTTGTTTATGACACAACAATAAATGATTACCTTAACTTCTTATGTGCTTTAGGCTACAATGAAACACAAATTTCAACATTTTCAGAAGGTGGTGATTATAAATGTGCAAGGAATTTCAGCCTCCTCAACCTCAACTATCCTTCAATCACAGTACCAAATCTCTCTGGATCAGTCACGCTCACAAGAACACTGAAAATCGTTGGTGCTCCGGCTACATACAATGTTCGAGTTCAAAACCCAAGTGGGATCTCCATTTTTGTGAAACCTAACATATTGAAGTTCAAAAAGGTTGGTGAAGAAAAGACCTTTGAAGTAACCCTCAAGGTGAAGCAAGGAAAAGCAACAAATAATAAGTATGCATTCGGAAAAATGATATGGTCAGATGGGAAGCATCATGTGAAAAGTCCAATTGTAGTTAGGGCTCTCTAG 2328 0.4618 MRIPNLILSYSLPPLLLLLASGLHWPCCAAKQSYVVYMGAHSHDPAKLSPLDFNRVTHSHYEFLGSFLGSSDAAKDSIFYSYTKHINGFAATLEEEVAAEIAKHPKVLSVFENRGRKLHTTRSWDFMGLEQNGKTPSNSIWKKARYGEGVIIGNLDTGVWPESKSFNDKGFGPIPSKWRGICHNGSDPTFHCNRKLIGARYFNKGYASVVGKLNSSLESPRDTEGHGSHTLSTAGGNMVPGVSVFGQGCGTAKGGSPKARVAAYKVCWPPVAGNECFDADIMAAFDVAIHDGVDVLSVSLGGSAAAFFNDSVAIGSFHAAKHGIVVVCSAGNSGPAEGSAENLAPWYITVGASTMDREFPSYVVLGNNLSLKGESLSAAKLAHKFYPIIKATDAKLPSARVEDAVLCQNGTLDPKKVKGKILLCLRGVNARVDKGEQALLAGAVGMVLANDKINGNEILADPHVLAASQVNFTDGVSVFDYINSTKFPVAYITHPKTLIHTKPAPFMAAFSSKGPNIIVPEILKPDITAPGVSVIAAYTEDEGPTNQMFDKRRIPYNSVSGTSMSCPHISGVVGLLKTMYPSWSPAAIKSAIMTTATTLDNEAEQLLNATNGKATPFGYGAGHVEPNRAMDPGLVYDTTINDYLNFLCALGYNETQISTFSEGGDYKCARNFSLLNLNYPSITVPNLSGSVTLTRTLKIVGAPATYNVRVQNPSGISIFVKPNILKFKKVGEEKTFEVTLKVKQGKATNNKYAFGKMIWSDGKHHVKSPIVVRAL 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241938g00001 775 Pfam Fibronectin type-III domain 676 772 IPR041469 -
Stsc241938g00001 775 SUPERFAMILY PA domain 404 488 IPR046450 -
Stsc241938g00001 775 Pfam Subtilase family 147 604 IPR000209 GO:0006508|GO:0008236
Stsc241938g00001 775 SUPERFAMILY Subtilisin-like 118 634 IPR036852 GO:0004252|GO:0006508
Stsc241938g00001 775 Pfam PA domain 409 475 IPR003137 -
Stsc241938g00001 775 Gene3D Peptidase S8/S53 domain 149 643 IPR036852 GO:0004252|GO:0006508
Stsc241938g00001 775 FunFam Subtilisin-like protease SBT1.5 149 391 - -
Stsc241938g00001 775 Gene3D - 356 499 - -
Stsc241938g00001 775 ProSiteProfiles Serine proteases, subtilase domain profile. 123 630 - -
Stsc241938g00001 775 FunFam Subtilisin-like protease SBT1.5 647 775 - -
Stsc241938g00001 775 Pfam Peptidase inhibitor I9 33 119 IPR010259 -
Stsc241938g00001 775 ProSitePatterns Serine proteases, subtilase family, serine active site. 561 571 IPR023828 -
Stsc241938g00001 775 CDD Peptidases_S8_3 117 597 IPR034197 -
Stsc241938g00001 775 Gene3D - 647 775 - -
Stsc241938g00001 775 PRINTS Subtilisin serine protease family (S8) signature 222 235 IPR015500 -
Stsc241938g00001 775 PRINTS Subtilisin serine protease family (S8) signature 560 576 IPR015500 -
Stsc241938g00001 775 PRINTS Subtilisin serine protease family (S8) signature 147 166 IPR015500 -
Stsc241938g00001 775 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 35 772 IPR045051 -
Stsc241938g00001 775 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 27 119 IPR037045 -
Stsc241938g00001 775 FunFam subtilisin-like protease SBT1.5 356 499 - -
Stsc241938g00001 775 CDD PA_subtilisin_like 362 492 - -
Stsc241938g00001 775 FunFam Subtilisin-like protease SBT5.3 24 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241938g00001 Stsc-Chr241938 9645 23311 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241938g00001 33 773 Subtilisin-like Serine Gene Family AT2G04160 65.323 0.0 1004