Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241934g00005 ATGCCGGCAGCCGGTCATGAGCAAGAGTTGGATCCATCAAATTCTGGTGCTGTTGCAAATACTCCTCAAGTAGTAAAACAAAAGTCTGAAACTACGTCCAAGAATAAACAAGAGACCAAAGCAACCAAGAAAGAATCTCCAAACAGCTTCCCAACTAATGTCAGGAGCTTGATATCTACCGGTATGCTTGATGGTGTTCCTGTAAAGTATGTCTCAGCGGCCCGGGAGGAACTTCGTGGAATCATAAAAGGATCTGGCTATCTTTGTGGGTGTAAGAAATGCAACTATTCGAAGGCTCTGAATGCATATGAGTTTGAGAGACATGCTAATTGCAAATCAAAACATCCAAACAATCACATTTATTTTGATAATGGGAAGACCATTTATCAAATAGTACAGGAATTGAAGAGTACCCCTGAAAGTATGTTGTTTGATACAATTCAAACTGTTTTTGGCGCACCGATTAATCAGAAAGCATTTCGCTATTGGAAAGAATCATACCAAGCAGCAACGCGCGAGCTTCAGCGCATCTATGGAAAAGAATAA 546 0.4066 MPAAGHEQELDPSNSGAVANTPQVVKQKSETTSKNKQETKATKKESPNSFPTNVRSLISTGMLDGVPVKYVSAAREELRGIIKGSGYLCGCKKCNYSKALNAYEFERHANCKSKHPNNHIYFDNGKTIYQIVQELKSTPESMLFDTIQTVFGAPINQKAFRYWKESYQAATRELQRIYGKE 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241934g00005 181 MobiDBLite consensus disorder prediction 1 53 - -
Stsc241934g00005 181 Pfam Tify domain binding domain 80 135 IPR032308 -
Stsc241934g00005 181 MobiDBLite consensus disorder prediction 13 30 - -
Stsc241934g00005 181 PANTHER AUTOIMMUNE REGULATOR 23 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241934g00005 Stsc-Chr241934 22726 23518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241934g00005 39 168 PHD Transcription Factor Family AT3G53680 49.618 2.58e-41 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241934g00005 - - gmx:100802229 308.531