Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241933g00006 ATGGAGGAGGCGAAGCTCATCATCAGCCACGGTGGCACCATCAAGTTCCACCGCGGTAAAAACCAGCACGTCTACCACGGTGGAAGAAACAGGATGCTCCACGTCCCCCGGAACATCAGCTTCAAAGAAATCACTGTCGTACTCTCTGCCATGTGCGGCGGAGGTTTCTCGGTCGGTTACTTCAAGTACCAGATCGACGGCTTCGACCTAGACACACTCGTAAGCGTGACGAACGAGCGTGACCTCCGAAACATGATGCGGGAATTCGATTACGCCGAACCTGATTCCGTCATGCGAATCTTTCTCTTCCTCGAGCATCGTCGCCATCCGCGCGTGAATCACGTGCTCGAGTACTACTGGAGGAGGATGCAGGAGCGCGTGGTGATGACTGCCTTTCCTTCTCCTAGAGCAGCGCGGACGTGCTGCTTTTTACTTGTCACTACAGTAAAGGGTGCTGGATGGTGTCCTACTCAAATTATTAACCATGGCACACAGGATACTAATTTTGCGTCTCATGTGGATGTAGAGGAGTATAAGAGTGAGATTATTAAGTTGAAAGCAAAGGCTGCCGAAGAAAAGAAGAGACAGTTGATAGAACATATTGTGAGATATCTACTCCAGCAGCAAAAAGATAATTTATTTCCCAACATTACTGTAGAAATGAACTCCTTAAATAATAGACCTTCTTCTACTGATACTCAAGACCTCCACGGATCACCATGA 723 0.4827 MEEAKLIISHGGTIKFHRGKNQHVYHGGRNRMLHVPRNISFKEITVVLSAMCGGGFSVGYFKYQIDGFDLDTLVSVTNERDLRNMMREFDYAEPDSVMRIFLFLEHRRHPRVNHVLEYYWRRMQERVVMTAFPSPRAARTCCFLLVTTVKGAGWCPTQIINHGTQDTNFASHVDVEEYKSEIIKLKAKAAEEKKRQLIEHIVRYLLQQQKDNLFPNITVEMNSLNNRPSSTDTQDLHGSP 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241933g00006 240 Gene3D - 23 105 - -
Stsc241933g00006 240 Pfam PB1 domain 24 103 IPR000270 GO:0005515
Stsc241933g00006 240 SMART PB1_new 16 105 IPR000270 GO:0005515
Stsc241933g00006 240 SUPERFAMILY CAD & PB1 domains 21 108 - -
Stsc241933g00006 240 Coils Coil 175 195 - -
Stsc241933g00006 240 PANTHER OS05G0427100 PROTEIN-RELATED 4 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241933g00006 Stsc-Chr241933 52898 54376 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241933g00006 5 103 MAP Kinase Kinase Kinase AT1G79570 33.333 2.87e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241933g00006 - - adu:107464532 111.694