Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241933g00002 ATGGAGATCCACGAAGCAAAGTTTCTTTGCAGCTATGGCGGCAAGATCGAGCCTATTGGCCGCGGCAACAAGCTCACCTACGTCGGCGGCATCAATAAGATGCTTTATGTTGACAGGAGAATTTCCTTCAAAGATATGGTTGCCGAAGTCTCCGGCCTCTTTGACGATGCCGCTAACGGCGACAACTTCTTCAAATACCAACTTCCCGGCGGCGATGGCCTCCATTCTCTCGTCTCTGTAACCAACGACGACGAACTCCTCAACATGATGCTCAAGTTTGATCAACTCTACCGCGTTTCCCCTAGACACGCCCGCATGAGACTCTTCCTCTTCCGAAACCAAAGACCTCTCGATTCAGTTGATCGGCTATCTTCGAATTTTGGAAAGAATGATGTGTTTATCAGCTCTAGAGGGGATGGCACTCTTGACGAAGCTCTGAATCAAAACCAAATAAAAACCTTCGTTGATGATGAACTTCGCAAAGGGGATTGCATCTTGGCTTCTCTTACAAGAGCTATTGAAAATTCTCTGTATCTATTGTGA 543 0.4696 MEIHEAKFLCSYGGKIEPIGRGNKLTYVGGINKMLYVDRRISFKDMVAEVSGLFDDAANGDNFFKYQLPGGDGLHSLVSVTNDDELLNMMLKFDQLYRVSPRHARMRLFLFRNQRPLDSVDRLSSNFGKNDVFISSRGDGTLDEALNQNQIKTFVDDELRKGDCILASLTRAIENSLYLL 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241933g00002 180 Gene3D - 125 180 IPR035897 -
Stsc241933g00002 180 PANTHER OS05G0427100 PROTEIN-RELATED 6 124 - -
Stsc241933g00002 180 SUPERFAMILY CAD & PB1 domains 23 115 - -
Stsc241933g00002 180 SUPERFAMILY Toll/Interleukin receptor TIR domain 124 179 IPR035897 -
Stsc241933g00002 180 Pfam PB1 domain 24 112 IPR000270 GO:0005515
Stsc241933g00002 180 SMART PB1_new 20 113 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241933g00002 Stsc-Chr241933 24578 25120 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241933g00002 2 111 MAP Kinase Kinase Kinase AT5G57610 41.818 5.00e-19 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241933g00002 - - adu:107464449 240.736