Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241932g00008 ATGGCATGGTGCAATGACAGTAATGAGAAAGAGAGGGGCAATGAGGATTTCATTGCTTCCAATACTACTGTTAGACCTAAACCTAACCAAGAAATTCGAAACATAACTTGCCCCTCCTGTGGTCATAACATTCAAATCCATGAACAGGGTGGAATTCAAGATTTGCCGGGTTTACCAGCTGGAGTGAAGTTTGATCCGAATGACATTGAAATATTGGAGCATTTGGAGGCAAAAGTGATGTCTGATGTGCGTAACCTTCATCCTCTCATTGATGAGTTCATACCAACGCTTCAAGGAGAGAATGGCATCTGTTATACACACCCAGAGAAGCTACCTGGAGTAAATAAAGATGGACAAATCCGGCACTTCTTCCACAGGCCTTCAAAAGCATACACAACAGGAACAAGGAAGAGAAGAAAGGTTCACACCGAAGAAGACGGAAGCGAAACACGGTGGCACAAGACAGGAAAAACAAGGCCGGTTGTCACCGGCGGCCTAGTGAAGGGTTTCAAGAAGATTCTAGTACTATACACAAACTATGGAAGGCAAAGAAAGCCTGAGAAAACTAGCTGGGTGATGCACCAATACCATCTTGGAAGCAATGAAGAAGAGAGAGATGGTGAACTTGTTGTTTCAAAAGTGTTCTACCAAACACAACCTAGACAATGCGGCAATTCCATTATCATAAAGGAAGATGATGATCTTCCCTATGAAAAGATATTGATGATGGATAATAGTAGTAAGAAGCACAACAACAACAATGATGATGATGATATCAGAATACCTAGAAATGCTGCTGCTGATGCTCCTCTTGTGGATTACTACATAAACTATGAACATAATAGAGAAAGTTGTTCACCTCATCAACTTATTCCAAACATGGTTGTCCAAGGTGATTCCTCTTCTCTTTATCGCTTTGCTTCGTCATCAGTGGACGGGAATGGAAACAAATCAAGACTTATTGACAGAAACTTGTAG 978 0.4141 MAWCNDSNEKERGNEDFIASNTTVRPKPNQEIRNITCPSCGHNIQIHEQGGIQDLPGLPAGVKFDPNDIEILEHLEAKVMSDVRNLHPLIDEFIPTLQGENGICYTHPEKLPGVNKDGQIRHFFHRPSKAYTTGTRKRRKVHTEEDGSETRWHKTGKTRPVVTGGLVKGFKKILVLYTNYGRQRKPEKTSWVMHQYHLGSNEEERDGELVVSKVFYQTQPRQCGNSIIIKEDDDLPYEKILMMDNSSKKHNNNNDDDDIRIPRNAAADAPLVDYYINYEHNRESCSPHQLIPNMVVQGDSSSLYRFASSSVDGNGNKSRLIDRNL 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241932g00008 325 Gene3D NAC domain 68 221 IPR036093 GO:0003677|GO:0006355
Stsc241932g00008 325 Pfam No apical meristem (NAM) protein 59 198 IPR003441 GO:0003677|GO:0006355
Stsc241932g00008 325 SUPERFAMILY NAC domain 52 217 IPR036093 GO:0003677|GO:0006355
Stsc241932g00008 325 ProSiteProfiles NAC domain profile. 58 217 IPR003441 GO:0003677|GO:0006355
Stsc241932g00008 325 FunFam NAC domain-containing protein 73 67 221 - -
Stsc241932g00008 325 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 27 245 IPR044799 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241932g00008 Stsc-Chr241932 41500 44816 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241932g00008 1 237 NAC Transcription Factor Family AT4G28500 68.750 1.53e-121 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Stsc241932g00008 NAM 5.5e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241932g00008 - - gmx:100783888 419.083