Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241931g00005 ATGGCGAAACGGAATAGTGTTACCTCCATAGCTTTAACATCACTAAAGCTACTACTAATTATGAACGTCTTCATCATTTCCATTAATTGTTTTCATCATGATGATGATGAAGAGCGACACATATACTTAGTCCTATTGGAAGGAGATGGAATTGCTTTCCAAAAAGGTTCTCGTACTCAAGATTCAACAACATTTGATCCCATCAGTTTAGCCGCGAAAGCACATGCAAAACACGATGAAATGCTGCAAAGCGCTCTTGAAGAAGGAACCTACAACAAGCTCCACAGCTACAAACACATCTTCAATGGCTTCTCCGTCCACACCACCCCTTCCCAGGCCAAGAAGCTCAGAACCTTCCCCGGAGTGAAGCTTGTAGAGAGAGACACCGGATTCAAGCGTATGACAACCTACACTCCCCAGTTTCTAAGCTTACCGAGTGGGATATGGACGCAGCTTGGAGGACCGAAACACGCCGGCGAAGGTGTTGTGATTGGTTTTGTGGACAGCGGCATCAACCCTAACCACCCTAGCTTCGCTTACGATCCCAAGCTGTACCCTTTCAACCCTAACCTCTCTTTCTCATCGGCTGAGTGTCAGTCCGGTCCCTTCTTCCCTGCTTCTTCTTGCAATGGCAAGATTCTATCTGCCAAGTTCTTCTCTGCTGGTTTCCAAGCTACTTATCAGCTTAATGCTTCTATAGATTTCCTTTCACCCTTTGATGCTGATGGACATGGCAGTCATGTTGCATCTATTGCTGCTGGAAATAGTGACGTTCCAGTTGTTGTGGACGGTTTCTATTTTGGGAAAGCCAGCGGTATGGCACCTCGTGCAAGGATCGCGGTTTATAAGGCTATTTATCCATCCGGATCAAGTACTGCAGATATTGTTGCAGCCATCGACTGTGCTGTGTTGGATGGGGTGGATATCTTATCAATCAGTGTGGGACCAGATGATCCACCACAAGACACATTGACCTTCTTAGGCATGTTTAATATCGCCATGTTATTTGCTAGGAAAGCAGGAGTTTTTGTGGTTGAAGCTGCAGGGAACAAGGGTCCAGCACCTGCATCTGTGATCTCTTTTAGTCCCTGGACCATGGGGGTTGGCTTTTCAACCACTGACAGAACCTACCCTGCTCATCTTCTTCTTGGAAATGGACAAAAGCTAGATGGTCTTGGCATGTCAGGGCCAAGTTTTGGAAATGGAAATATCTTACAAACGATGGTGTTAGCCAAGGATGCAGCGAAAATGAATGGAACATTCTCACAGGCTCCGGAATATATAGAAGAGTGCCAACATCCAGATGCTTTCAACGGTAGCTTGGTGTTTGGAAATGTGGTTATCTGTACCTTCTCAGCTGGATTAATTAAGGGAACCTCCTCTTTTGCTGCCATTGTTGATACGGCAAACACTCTAGGGTTCTCAGGTTTTATCCTTGCCGCGGATCCAAGATATGGTAGTTACGTTGCACCAGCACTTCCTTATGCTCTTCCTGCCATCATGATCTCTCTTATAGATGATGCTAAGGTTATATATCAATATTATGAAGAACATACCAAGAGGGATGAGAAAGGAAATGTGATGGAATCTGACGCCATGGCAGCTATAGGGGAAGGAAGAGAAGCCTTGTACATGGGGCGATCACCGGTTGTTAGTAGATTATCTTCAAGGGGTCCAGATATCATTGACAAACATAACAGACTTGCTGATGTACTTAAACCTGATGTTCTTGCTCCAGGGGACCAAATATGGGCAGCCTATAGCCCCATGAGTGTCAATGAGCCCTTTCTGAGAGGGAAGGAATTTGCATTACTATCTGGTACCAGCATGTCCACCCCTCATGTATCCGGAATCGCAGCACTAATCAAGCAATATAATTCATCATGGACTCCATCTATGATAGCATCTGCAATAATCACAACCAGCACAAAGTTTGATAATCATGGAGATAATATAATGGCAGAAGGCTATGAGATAGGTACCTTGCATCCCTCCACTCCCTTTGATTCTGGGGCAGGCATTGTCAATGCTAACCGTGCCAATGATCCAGGACTGGTTCTGCCATCAGAGTTTGCAGACTATGTCAGCTTCTTATGCTCTTTGCCCGACGTTGGCCAGGATGTAGTATTGGCTGTCATTGGGGAACCTTGCGACCAGTCATTTCCCTATCCATATGATCTAAACCTTCCTTCAGTAACAATATCTGCACTGACGGGCTCAGCTTTGGTGCGAAGAACTGTCATGAATGTGGGCAACAAAACGGAGACATATGTGGCCACTGTTCTGCCTCCAAATGGAACTACTGTCACTCTGTCTCCACCTTGGTTTACCATAAGTCCGCAAGAAACACAAGATCTGAACATTCAATTCAATGTTGTGCAATCCATGAAAAAGTTCAGCTTTGGTGAAATTGTTTTGACAGGAAATCTGAATCACATTGTAAGAATAACGTTGTCAGTTTTACCTACTTCAATATATTGA 2481 0.4482 MAKRNSVTSIALTSLKLLLIMNVFIISINCFHHDDDEERHIYLVLLEGDGIAFQKGSRTQDSTTFDPISLAAKAHAKHDEMLQSALEEGTYNKLHSYKHIFNGFSVHTTPSQAKKLRTFPGVKLVERDTGFKRMTTYTPQFLSLPSGIWTQLGGPKHAGEGVVIGFVDSGINPNHPSFAYDPKLYPFNPNLSFSSAECQSGPFFPASSCNGKILSAKFFSAGFQATYQLNASIDFLSPFDADGHGSHVASIAAGNSDVPVVVDGFYFGKASGMAPRARIAVYKAIYPSGSSTADIVAAIDCAVLDGVDILSISVGPDDPPQDTLTFLGMFNIAMLFARKAGVFVVEAAGNKGPAPASVISFSPWTMGVGFSTTDRTYPAHLLLGNGQKLDGLGMSGPSFGNGNILQTMVLAKDAAKMNGTFSQAPEYIEECQHPDAFNGSLVFGNVVICTFSAGLIKGTSSFAAIVDTANTLGFSGFILAADPRYGSYVAPALPYALPAIMISLIDDAKVIYQYYEEHTKRDEKGNVMESDAMAAIGEGREALYMGRSPVVSRLSSRGPDIIDKHNRLADVLKPDVLAPGDQIWAAYSPMSVNEPFLRGKEFALLSGTSMSTPHVSGIAALIKQYNSSWTPSMIASAIITTSTKFDNHGDNIMAEGYEIGTLHPSTPFDSGAGIVNANRANDPGLVLPSEFADYVSFLCSLPDVGQDVVLAVIGEPCDQSFPYPYDLNLPSVTISALTGSALVRRTVMNVGNKTETYVATVLPPNGTTVTLSPPWFTISPQETQDLNIQFNVVQSMKKFSFGEIVLTGNLNHIVRITLSVLPTSIY 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241931g00005 826 Pfam Fibronectin type-III domain 726 820 IPR041469 -
Stsc241931g00005 826 Pfam Peptidase inhibitor I9 70 130 IPR010259 -
Stsc241931g00005 826 Gene3D - 374 544 - -
Stsc241931g00005 826 SUPERFAMILY Protease propeptides/inhibitors 85 129 - -
Stsc241931g00005 826 Pfam Subtilase family 159 648 IPR000209 GO:0006508|GO:0008236
Stsc241931g00005 826 Gene3D - 699 821 - -
Stsc241931g00005 826 Gene3D Peptidase S8/S53 domain 161 694 IPR036852 GO:0004252|GO:0006508
Stsc241931g00005 826 PRINTS Subtilisin serine protease family (S8) signature 240 253 IPR015500 -
Stsc241931g00005 826 PRINTS Subtilisin serine protease family (S8) signature 159 178 IPR015500 -
Stsc241931g00005 826 PRINTS Subtilisin serine protease family (S8) signature 606 622 IPR015500 -
Stsc241931g00005 826 ProSitePatterns Serine proteases, subtilase family, serine active site. 607 617 IPR023828 -
Stsc241931g00005 826 ProSiteProfiles Serine proteases, subtilase domain profile. 136 681 - -
Stsc241931g00005 826 ProSitePatterns Serine proteases, subtilase family, histidine active site. 244 254 IPR022398 -
Stsc241931g00005 826 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 27 132 IPR037045 -
Stsc241931g00005 826 SUPERFAMILY Subtilisin-like 134 685 IPR036852 GO:0004252|GO:0006508
Stsc241931g00005 826 CDD PA_subtilisin_like 381 515 - -
Stsc241931g00005 826 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 87 818 IPR045051 -
Stsc241931g00005 826 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 164 175 IPR023827 -
Stsc241931g00005 826 CDD Peptidases_S8_3 134 643 IPR034197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241931g00005 Stsc-Chr241931 24917 28908 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241931g00005 33 820 Subtilisin-like Serine Gene Family AT1G62340 56.171 0.0 895
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241931g00005 - - gmx:100798915 1067.37