Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241929g00009 ATGGACTATCGTTGGACCAATGGGAGACAGGACACTGGCAGTGGCCGAGACAGGAGACATCATAAAAGGGACCAGGTATATCAGGACTCCCTTGTTGAGAATTCGTTGGAGGATTTTCGTTTGCCGATCCACCACAGGCCAACAGAGAATGTTGACCTGGAAAATGTTGAACAAGCATCCCTTGACACACAGTTAACGTCATCTAATATTGGCTTCAAGCTTCTCCAAAAGATGGGTTGGAAAGGAAAAGGTCTTGGGAAGGATGAGCAAGGTCTGTTACTGTGTTCTCCTTTTCATCAATAG 303 0.4587 MDYRWTNGRQDTGSGRDRRHHKRDQVYQDSLVENSLEDFRLPIHHRPTENVDLENVEQASLDTQLTSSNIGFKLLQKMGWKGKGLGKDEQGLLLCSPFHQ 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241929g00009 100 Pfam G-patch domain 68 92 IPR000467 GO:0003676
Stsc241929g00009 100 MobiDBLite consensus disorder prediction 1 26 - -
Stsc241929g00009 100 ProSiteProfiles G-patch domain profile. 67 92 IPR000467 GO:0003676
Stsc241929g00009 100 PANTHER FINGER DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G04180)-RELATED 1 93 - -
Stsc241929g00009 100 MobiDBLite consensus disorder prediction 11 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241929g00009 Stsc-Chr241929 31241 31725 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241929g00009 13 92 C2H2 Transcription Factor Family AT5G26610 65.000 5.28e-34 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241929g00009 - - gmx:100793206 162.155