Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241929g00008 ATGAAAATTCAGGTGCTAGCAGAACGTGAACAAAAAATTCAAACCGAAGTGAAAGAGATCCGAAAGGTGTTTTACTGTGAACTCTGCAACAAGCAATACAAATTGGCAATGGAATTCGAAGCACACTTGAGCTCTTATGATCACAATCACAGAAAGCGTTTCAAAGAAATGAAGGAAATGCATGGTAGTAGTAGCCGAGACGATAGGCAAAAGCGAGAACAACAGCGTCAAGAGAAAGAGATGGCTAAGTTTGCTCAAATGGCTGATGCACAAAAGCAACAACGGCTTCAACTTCAACAAGAGTCTGGATCTGGATCTGGATCTGGATCTGCGTCACTTTCATCTGAATCAAGAACTGCTACTGCACTCACAGATCAAGAGCAGCGGAACACGTTGAAATTCGGGTTTTCTTCTAAAGGCACTACTTCCAAGGTTTCGGTTGGCATCAAGAAGCCAAATATTGCAAAGAAACAAAATGTTCCCATTTCATCGATTTTTGGAAATGATTCTGATGAAGAATAG 522 0.41 MKIQVLAEREQKIQTEVKEIRKVFYCELCNKQYKLAMEFEAHLSSYDHNHRKRFKEMKEMHGSSSRDDRQKREQQRQEKEMAKFAQMADAQKQQRLQLQQESGSGSGSGSASLSSESRTATALTDQEQRNTLKFGFSSKGTTSKVSVGIKKPNIAKKQNVPISSIFGNDSDEE 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241929g00008 173 Coils Coil 81 101 - -
Stsc241929g00008 173 ProSitePatterns Zinc finger C2H2 type domain signature. 26 48 IPR013087 -
Stsc241929g00008 173 MobiDBLite consensus disorder prediction 57 173 - -
Stsc241929g00008 173 SUPERFAMILY beta-beta-alpha zinc fingers 11 52 IPR036236 -
Stsc241929g00008 173 Pfam Zinc-finger double-stranded RNA-binding 24 51 IPR022755 -
Stsc241929g00008 173 MobiDBLite consensus disorder prediction 90 148 - -
Stsc241929g00008 173 PANTHER FINGER DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G04180)-RELATED 2 173 - -
Stsc241929g00008 173 MobiDBLite consensus disorder prediction 57 85 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241929g00008 2 173 C2H2 Transcription Factor Family AT5G26610 58.857 3.32e-58 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241929g00008 - - gsj:114407513 238.424