Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241922g00002 ATGGATTCAATCTTAAATTACCTAAACACCACCACAATAGCTGGAATCCTTTCTCTAATAATCTTACTCCTTGTACATCTCTTTCGTCCCTTCAAACTTGGTGGCAACCTCAAAGAACCTCCCATGGCATCTGGTGCGTGGCCCATACTGGGTCACCTTCCATTGATGCGCGGTTCACAGCCACTCCACATAACTTTAGGCGCCATGGCTGACAAATACGGACCCCTTTTCACCATCAAGCTTGGCGGCACAAAGACCATAGTACTCAGCAACTGGCAAATGGCCAAAGAATGCTTCACCACAAACGACATGGCCGTTTCGTCTCGCCCCAAGACCGTTGCACTTGAGAACCTTACATACAACTTCGCAGCTTTCGGATTAGGACCGTACGGTCCGTATTGGCGCGAGATTCGCAAGATCGCAACGTTAGAGCTTCTCTCGAATCGCCGCATAGAGCTACTAGGCCATGTTCGGGTCTCTGAAGTTCAAGCTTCCATTAATGAGCTCTATAGTGCTTGGTCCAGCAAGAAAAACAAGGAATCTTATTCTGGTGATGAGGGTTATGTGTCAGTGGAGTTGAATCAATGGTTTGCGCAATTGACCTTCAACACGACCCTTAGAATGATTGCAGGAAAAAGATACTTGGGTGCTACTGTGGATGAGGAAAAGGCGAAAAGGTGTTTGAAAATAATAGAAGATTTTATGTATCTTTTGGGAGTATATACTATCGGAGATGCTATTCCTGCGCTAAGGTGGATGGATTTGGGAGGCCATGAGAGAGCCATGAAAAAAAGTGCTAAGGAATTTGACGATATTTTGGATGAATGGTTAGAGGAGCATAAAACAAGTTTCCGTGGAAAGGCTACCAATGAGCGAGACTTCATGGATGTTATGATTTCTATTCTTGGAGATACACAGATTCATGGGTTTGATGCCGATACCATAATCAAAGCCACAACAATGTCAATGATGCTGGGAGGAACTGATACAACCGGTGTAACACTTACCTGGGCAGTATGTTTGTTATTAAATAATCCTCGTACATTGAAAAAGGCGAAAGAAGAACTCGATAGTCATGTCGGAAAAGAGAGATGCATAACAGAGTCAGATTTAAGCAAATTAGTGTATCTTCAAGCTATAGTGAAAGAAACACTAAGACTATATCCAGCAGGTACTCTTGGAGCACCTCGTGAATTCATAGAAAATTGCATTTTGGGTGGCTATCATGTGAAAAAAGGATCTCGACTAATTATAAATATATGGAAGATTCAAACTGATCCTACTATTTGGTCAGATCCCTTGGATTTTAAACCAGAGAGGTTCCTCACAACTCACAGAGACACTGATGTTAAGGGTCAGCATTTTGAGCTTTTGCCATTTGGAAGTGGTAGAAGGATCTGTCCTGGAATGTCGTTTGCCCTCCAAATGGTTCACTTTGCTTTGGCTAGATTCTTGCATTCTTTTGAAATTTTAAAACCATCTGATGAACCAATTGATATGACTGGTATTCTTGGATTATCCTATGCCAAAGCTACTCCATTAGAGATTCTGATCAAGCCATGTTTGGCTCCTCGTTGTTTTGATGAAACCATGTAA 1596 0.4229 MDSILNYLNTTTIAGILSLIILLLVHLFRPFKLGGNLKEPPMASGAWPILGHLPLMRGSQPLHITLGAMADKYGPLFTIKLGGTKTIVLSNWQMAKECFTTNDMAVSSRPKTVALENLTYNFAAFGLGPYGPYWREIRKIATLELLSNRRIELLGHVRVSEVQASINELYSAWSSKKNKESYSGDEGYVSVELNQWFAQLTFNTTLRMIAGKRYLGATVDEEKAKRCLKIIEDFMYLLGVYTIGDAIPALRWMDLGGHERAMKKSAKEFDDILDEWLEEHKTSFRGKATNERDFMDVMISILGDTQIHGFDADTIIKATTMSMMLGGTDTTGVTLTWAVCLLLNNPRTLKKAKEELDSHVGKERCITESDLSKLVYLQAIVKETLRLYPAGTLGAPREFIENCILGGYHVKKGSRLIINIWKIQTDPTIWSDPLDFKPERFLTTHRDTDVKGQHFELLPFGSGRRICPGMSFALQMVHFALARFLHSFEILKPSDEPIDMTGILGLSYAKATPLEILIKPCLAPRCFDETM 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241922g00002 531 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241922g00002 531 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241922g00002 531 PRINTS P450 superfamily signature 467 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241922g00002 531 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241922g00002 531 SUPERFAMILY Cytochrome P450 46 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241922g00002 531 Pfam Cytochrome P450 42 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241922g00002 531 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
Stsc241922g00002 531 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241922g00002 531 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241922g00002 531 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241922g00002 531 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241922g00002 531 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241922g00002 531 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241922g00002 531 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241922g00002 531 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241922g00002 531 PANTHER CYTOCHROME P450 82C3-RELATED 21 525 - -
Stsc241922g00002 531 CDD CYP82 74 521 - -
Stsc241922g00002 531 FunFam Cytochrome P450 82C4 32 519 - -
Stsc241922g00002 531 Gene3D Cytochrome P450 34 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241922g00002 Stsc-Chr241922 6124 9316 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241922g00002 8 527 Cytochrome P450 AT4G31940 47.269 0.0 524
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241922g00002 - - aip:107643961 895.96