Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241919g00006 ATGTGTATAACAAAGGTAAGAATCATTGACGACAATAATGATGGTAAGCAAGAAAAAGAAAAGGAAGCATTTGCTCTTACAACAGCATCAGAGCTCTTAATTAAAGGAAGTGAAAACCCTTGTATGAATCCGATGGTTGAGTTGGGTACTGATCCAACTCTTTCAGTTTCGTTCCATCATATAAACAAGTGGTTTTACGACGAAAATCGCACTCTATTCGAAATCGCCTTGGGGAAACCTTTGAGGGAGTTTCTTGATAAGAACCCTACACACATGAGCTTGTTCAATGAAGCTATGGCCAGTGATTCTCAGATGATGAAGTTGGCACTGAAGGATCACAACATGGCCTTTCAGGGCTTGGAATCAATCGTGGATGTTGGTGGTGGAAATGGAACCACAGCTCAAATTATCGGTGAAAATTTCCCAGAACTCAAATTTATAGTATTTGATCTTCCACATGTTGTGATAGGTCTGCAGTCAAGCAACAATAATCTGAGCTTTGTTGGTGGAGACATGTTTGAATCCATTCCTAAAGCCGACGCAATTCTTCTTAAGCTTAAGGTACGGATCTAG 573 0.4014 MCITKVRIIDDNNDGKQEKEKEAFALTTASELLIKGSENPCMNPMVELGTDPTLSVSFHHINKWFYDENRTLFEIALGKPLREFLDKNPTHMSLFNEAMASDSQMMKLALKDHNMAFQGLESIVDVGGGNGTTAQIIGENFPELKFIVFDLPHVVIGLQSSNNNLSFVGGDMFESIPKADAILLKLKVRI 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241919g00006 190 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 190 IPR016461 GO:0008168
Stsc241919g00006 190 Gene3D Vaccinia Virus protein VP39 36 187 IPR029063 -
Stsc241919g00006 190 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 39 185 IPR029063 -
Stsc241919g00006 190 Pfam O-methyltransferase domain 58 185 IPR001077 GO:0008171
Stsc241919g00006 190 PANTHER O-METHYLTRANSFERASE 22 185 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241919g00006 Stsc-Chr241919 54124 54696 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241919g00006 24 185 Monolignol Biosynthesis Gene Families AT5G54160 33.951 4.46e-21 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241919g00006 K22588 - ahf:112740688 259.225