Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241916g00003 ATGGGTATTCGCATGCCGTTTATGGTGCTCCAAGCAAAGCAGATATTCAAGTCAACATCACAGCATCTTCAAGGTGGAAACCAGTCAAATGTTGTTCCAAAGGGACACATAGCAGTGTATGTTGGAGAGTTGCAGAAGAAGCGCTTTGTGGTTCCAATATCATACTTGAGTCATCCTTTGTTTGTTGACTTGCTAGACAGAGCAGAGGAAGAGTTTGGATTCAACCATCCAATGGGAGGACTCACAATTCCATGCAAAGAAGATGCATTCATCAACCTTACCTCTCAGCTCGGTGCTTTGTGA 303 0.4389 MGIRMPFMVLQAKQIFKSTSQHLQGGNQSNVVPKGHIAVYVGELQKKRFVVPISYLSHPLFVDLLDRAEEEFGFNHPMGGLTIPCKEDAFINLTSQLGAL 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241916g00003 100 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 11 97 IPR003676 GO:0009733
Stsc241916g00003 100 Pfam Auxin responsive protein 13 95 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241916g00003 Stsc-Chr241916 28361 28924 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241916g00003 18 90 Calmodulin-binding Proteins AT5G20810 50.685 8.45e-18 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241916g00003 K14488 - gmx:100803474 149.443