Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241915g00007 ATGGCACAAAATAAGACAGGTAACAAGTTAGGTACCCACACTGCAAAGGACCTTGGCATGTTTACTCAACACATCCATCCTGAGTTAGGTAGTGGTTCAGATACAGGACAGAAAGTGCAAAATAATATTGTTGTAGCTGGTGGGAGAGGGTTTTCAGAGAATATCAGTCATGATAGAGTTTCTTCTGGAAGAGTTCCTGATTTACCTGATATATCTCGATCTTCTGAGGATAGGTTTGTGTTGAGTAGGGAGAATGGTCATGTGAGATATGAAGAACTTACTAATATTTTAGGGTTGAGGAGAATGGACTCTAATGCTTCTGAGATGGCTGAAATTCTCTCTCTAAACAAGCAAGCTCAGGAGATGAAAAATGGGGCTCCTGTAGACAGTTTAAGCAAAATGGTCCCTGGCGATCGTGATATGAGAAACACAGTTTATGAATCAACTGGTGATCAACATGGTGCCAAACCAGTTGTATCATCCCTTCTTAGAAGTGAATCTTCTCATTCTAATGGATTTTCCGGTTCAGGAACTTTAGATGATTCTTTGCCTTGGAAAATGAAGCTTCTATGCAGCTCCGGAGGAAAAATATTACCCAGGCCTAGCGATGGAAAACTCAGATATGTAGGGGGAGAGACCCGAATAATATCTATAAGAAGGGATTTATCATGGGAAGAACTTGTAAAGAAGACCTCGGGTATTTGCAGGCAACCTCACGCAATCAAATACCAGCTTCCGGAGGAGGATCTGGATGCTCTAATATCTGTTTCCTCTGATGAGGATCTTCAAAATATGATAGAGGAATACCACGGGTTTGAAAGGCTTGAAGGTTCTCAAAGACTTAGAATATTTTTAGTTCCTTTGACTGAATCTGAAGAGACACCATCAACCGAAGTGAGCATGATTCAGCAAAGTGATCCCGACTACCAATATGTTGTTGCCGTGAATGGTATAGCAGATCCCAGTCCAAGGAAAAGCATTGGTGGGAAGAGTTTGACCAATGAAGCAAGTCAGTTCGCTCCAGTTTTTCAGAAAGTTTCTCCAAATCCCTCTTCTGCCTTTGAGATCACGGGTGCTGTTAATTCTTTAAATGGAGATGGGTTTCTGAATGATTCACTGAGTTTGCCAAGATGCTCATCAGTTTCTCCTATTCCTATTCAGGTATCAGGCTCTAGTGCAGGTTATGTGCAATTTCTTGGTAATGACCCGTTTCGGGGAAGTACTGAAAGCAATGTGCCATTTGTTACTGCTCAGCTACCCCCTGAGAACTCCAGCACAGCAATCACTGATTGGCAATACCCTCAGCATGGAGCTGTTGGTCAGTCCAAGATGCCCAATGGACAGCATTTTGGCAATTACAATCTTGGCAAGGAATTTGTGACTCCAGTACATGTTAATCCACGTGATGGTCGTGAAGATCAATTATTCAATGAAAGACTGTTTCATAGGGAAAAGGGAATCTGCCTTGGAAATCCTCTTTCATGTTTGGATGATCCAATATGTCAACAAGCTGAACCTGATGGAATTTCTGGTCCCCCCTATGGGCTGCCACATGCATTTTCTGATTCACAGTTGCACGAGAGTGCTGTTAGATCTGGTTACTGCTCACAAGAAAGAATTGGCCAATCTTTTTCCTTGAACCTTGAAAATGCTCAATTATCTTCAATCCTACTTTCTAATGTCTCACAAGGGAATCCTATGGAGCTTCAACATGATCCCATTCTCCACCATCCCCAAATACAAAGTAAGATACCAAAAGGTGATTCAGCCGAACTTTGCAAAAGGCAAGAAATGATGTCTTCTTCTCCATATTCAGATTCATTAGGAATGAACTGTCATGTTTATAATGATAGCATTTCAACTGAAAATAGGTACTCTAAAGCACAGCCTGGCATAAGTGACTATAGCTTTGTTCCAAAGGATATTCAAGATAACTCTGTTAAATTAGAAAAGATGAAGATAATTGAAGAGCATAATTGCATTCCAAGAAATGAGGGAAATGTTTATGTTGAGAAACCAGTCTTAATTGATATGGGAAACACGAGTGAATTGCATCTTTTGAACTCCTTCCCTGCTGGTAACTCAAATCCTCAGGTTAATATTCAAAAGAATTGGGAGGTTACATCTGAGAATAGAGTTCCTGCATCATCGGGTTTGGTGGAACTTTCTCCAAATGGTATTGTGAACAAGAGCTCATCTGGTCTTCTTGATATGAGCCAAAGGACTGATGGCAAGAAATGTGCATTAGCTGAAGGTTTGAATGGTAAACAAGATATTGACTCTTCGTTGACAAGGATATTTGATTTAAATGGCCCATTAAAATACGAAGAAAGCACTTCTGACAAAAGTAATATGGGCAATAATTTCTTTGAGTGGTCCATTAACCCAGATTCTCTTAAATGTGCACCAATTCAGCTTTCTCAGAACCAACTGGCTTCGGGCTTTCATGAAACTCCAACACTAAGCTCGGTTAGATTGCACCCTGCTTCACCTCATGTTGATTGTGGTCCAAAGTTCAACTTGCCAATTAATGTGAATACTGCAGGCGAGAATACTTCTTTTAGAAAGGCACCTTCTTTCCTTGATGACTCGATGAACAGTAGAGATCAAATCATTGATCTGTTTAGGCATGAAAAACCTGTGTCTGGAAAGTCAAAAGTTAAAGATATGTCAGATCTGTCAAAGAATATACAATGGTGTCATCAGGCAAGCCGAACACAGCCATTTGTCGCAGTAGAAAATGTGATCAGTGTTTCTCGAAATATTGAATCTTCAATGGTACAGAGCCTGTATGCTGTGGATGATGTTGGAAGTGATATTGGATCCGTTGCTCATACAGAAGCAGAAAGCATCCTCCCAGATTCCGAATTGGAGGATGTTAAAGATGATCAAACAGAGAAGCATGAATTCCTTTCTGATGCAATGATAGCAGAAATGGAAGCCAGCATATATGGTTTGCAGATAATAAGGAATGCTGATCTTGAAGACCTTCTGGAGTTAGGATCTGGTACTTATGGAACTGTTTATCATGGAAAATGGCGGGGAACAGATGTTGCTATAAAAAGAATTAAAAAGAGCTGCTTTGCAGGGAGATCTTCTGAGCAAGAACGGTTGGCAAAAGACTTCTGGAGAGAGGCACAAATCCTCTCAAATCTTCACCATCCCAATGTGGTGGCGTTTTATGGAATTGTACCAGATGGGATTGGTGGAACATTAGCAACAGTAACAGAGTTCATGGTTAATGGTTCTCTTAGGCATGTCCTCCTCAAGAAAGAAAGATTACTAGATCGTCGTCGAAAGCTGATAATTGCCATGGATGCAGCTTTTGGTATGGAATATTTGCACTCAAAAAACATTGTCCATTTTGATTTGAAATGTGACAACTTGCTTGTGAATCTACGGGATCCACAGCGACCCATATGCAAGGTTGGAGATTTTGGATTATCAAGAATCAAACGTAATACCCTTGTGTCTGGGGGTGTACGAGGGACCCTTCCATGGATGGCACCAGAGCTGTTGAATGGCAGCAGTAGCCGGGTTTCTGAGAAGGTTGATGTTTTCTCCTTTGGCATCTCACTGTGGGAGTTATTGACTGGAGAGGAACCATATGCAGACATGCATTGTGGTGCCATTATTGGGGGAATTGTAAAGAACACTCTTCGACCGCCTATTCCGGAACGCTGTGATCCTGAATGGAGGAAACTAATGGAAGAGTGTTGGTCAGCTGACCCGAACAGCCGACCATCATTCACAGAGATAACCAGCCGGTTACGATCCATGTCTGGAGCACTTCATGTAAAGGGAACTGGTCAAATTCAGTAG 3822 0.4142 MAQNKTGNKLGTHTAKDLGMFTQHIHPELGSGSDTGQKVQNNIVVAGGRGFSENISHDRVSSGRVPDLPDISRSSEDRFVLSRENGHVRYEELTNILGLRRMDSNASEMAEILSLNKQAQEMKNGAPVDSLSKMVPGDRDMRNTVYESTGDQHGAKPVVSSLLRSESSHSNGFSGSGTLDDSLPWKMKLLCSSGGKILPRPSDGKLRYVGGETRIISIRRDLSWEELVKKTSGICRQPHAIKYQLPEEDLDALISVSSDEDLQNMIEEYHGFERLEGSQRLRIFLVPLTESEETPSTEVSMIQQSDPDYQYVVAVNGIADPSPRKSIGGKSLTNEASQFAPVFQKVSPNPSSAFEITGAVNSLNGDGFLNDSLSLPRCSSVSPIPIQVSGSSAGYVQFLGNDPFRGSTESNVPFVTAQLPPENSSTAITDWQYPQHGAVGQSKMPNGQHFGNYNLGKEFVTPVHVNPRDGREDQLFNERLFHREKGICLGNPLSCLDDPICQQAEPDGISGPPYGLPHAFSDSQLHESAVRSGYCSQERIGQSFSLNLENAQLSSILLSNVSQGNPMELQHDPILHHPQIQSKIPKGDSAELCKRQEMMSSSPYSDSLGMNCHVYNDSISTENRYSKAQPGISDYSFVPKDIQDNSVKLEKMKIIEEHNCIPRNEGNVYVEKPVLIDMGNTSELHLLNSFPAGNSNPQVNIQKNWEVTSENRVPASSGLVELSPNGIVNKSSSGLLDMSQRTDGKKCALAEGLNGKQDIDSSLTRIFDLNGPLKYEESTSDKSNMGNNFFEWSINPDSLKCAPIQLSQNQLASGFHETPTLSSVRLHPASPHVDCGPKFNLPINVNTAGENTSFRKAPSFLDDSMNSRDQIIDLFRHEKPVSGKSKVKDMSDLSKNIQWCHQASRTQPFVAVENVISVSRNIESSMVQSLYAVDDVGSDIGSVAHTEAESILPDSELEDVKDDQTEKHEFLSDAMIAEMEASIYGLQIIRNADLEDLLELGSGTYGTVYHGKWRGTDVAIKRIKKSCFAGRSSEQERLAKDFWREAQILSNLHHPNVVAFYGIVPDGIGGTLATVTEFMVNGSLRHVLLKKERLLDRRRKLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLNGSSSRVSEKVDVFSFGISLWELLTGEEPYADMHCGAIIGGIVKNTLRPPIPERCDPEWRKLMEECWSADPNSRPSFTEITSRLRSMSGALHVKGTGQIQ 1273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241915g00007 1273 Gene3D Transferase(Phosphotransferase) domain 1 1082 1268 - -
Stsc241915g00007 1273 SUPERFAMILY CAD & PB1 domains 202 290 - -
Stsc241915g00007 1273 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 206 288 - -
Stsc241915g00007 1273 PANTHER SERINE-THREONINE PROTEIN KINASE 231 1258 - -
Stsc241915g00007 1273 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1119 1131 IPR008271 GO:0004672|GO:0006468
Stsc241915g00007 1273 SUPERFAMILY Protein kinase-like (PK-like) 983 1256 IPR011009 -
Stsc241915g00007 1273 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 987 1081 - -
Stsc241915g00007 1273 Pfam Protein tyrosine and serine/threonine kinase 999 1257 IPR001245 GO:0004672|GO:0006468
Stsc241915g00007 1273 SMART serkin_6 994 1261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241915g00007 1273 Gene3D Phosphorylase Kinase; domain 1 987 1081 - -
Stsc241915g00007 1273 PRINTS Tyrosine kinase catalytic domain signature 1113 1131 IPR001245 GO:0004672|GO:0006468
Stsc241915g00007 1273 PRINTS Tyrosine kinase catalytic domain signature 1184 1206 IPR001245 GO:0004672|GO:0006468
Stsc241915g00007 1273 PRINTS Tyrosine kinase catalytic domain signature 1228 1250 IPR001245 GO:0004672|GO:0006468
Stsc241915g00007 1273 PRINTS Tyrosine kinase catalytic domain signature 1076 1089 IPR001245 GO:0004672|GO:0006468
Stsc241915g00007 1273 Pfam PB1 domain 203 287 IPR000270 GO:0005515
Stsc241915g00007 1273 CDD PB1_UP2 190 285 - -
Stsc241915g00007 1273 Gene3D - 205 287 - -
Stsc241915g00007 1273 SMART PB1_new 201 288 IPR000270 GO:0005515
Stsc241915g00007 1273 CDD STKc_MAP3K-like 1000 1257 - -
Stsc241915g00007 1273 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1082 1273 - -
Stsc241915g00007 1273 ProSiteProfiles Protein kinase domain profile. 994 1264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241915g00007 1273 ProSitePatterns Protein kinases ATP-binding region signature. 1000 1025 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241915g00007 Stsc-Chr241915 54081 61725 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241915g00007 183 318 MAP Kinase Kinase Kinase AT1G16270 56.522 5.14e-37 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Stsc241915g00007 PK_Tyr_Ser-Thr 8.2e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241915g00007 - - aprc:113862751 1511.12