Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241912g00009 ATGAATAACACTTGCTCTGCTTCTGTCCAAATCGTTTCAGAATGCTTCGTGAAACCACACCACCACCAGACGCAAGACTCTACACAAGTCTTAAACCTAACACCATGGGATCTTGCCATGCTATCCGTCCATTACATCCAAAAAGGTCTTCTCTTCAAGAAGCCACAAAACCAACCTCAAGATTTCACAAAAAATCTATTGCACCATCTCAAGCACTCCCTCTCTCTTACCCTTGTCCATTTCTATCCCTTGGCCGGTCGCTTTATCACTCACCAAACCCAAGACCCTCCTTCTTACTCTATCTCCGTTGACTGCGTCAACTCTCCCGGAGCAAGATTCATCCATGCAACTGCAGATCTCACCATATCTGACATCCTCTCACCCGTTGACACCCCTCCAATTGTTCAAGCATTCTTTGACCATGACAGAGCAGTCAACCATGATGGCCACCACATGTCCCTCTTAACCATCCAAGTCACTGAGCTAATTGACGCTGTTTTCATTGGCTGCTCCATGAATCATTCCCTCGCTGATGGCACTTCCTACTGGAAATTCTTCAACTCATGGTCTGATATCTTTCAATCTCAACTCAAAGAGGGAAAAGACTTTGATGTTGCCAACATTATTTCCCATAAACCCATTCACAAGCGCTGGTTTCCACAGGGTTGCGATCCAATAATTAATCTCCCATTCAAACACCCTGACGAGTTTATTTGTAGATTTGAAGCACCAAAACTCAGAGAGAGGATCTTTCATTTCAGTGCAGAATCCATAGCTAAACTGAAAGCTAAGGCAAACAAAGAATCCAACACCAACAAAATATCTTCATTCCAATCATTATCCGCACTTGTTTGGAGATGCCTCACTCGTGCTCGCAGCTTACCTCATGATAGAAAGACGAGTTGCAAGCTGGCGATGAACAACAGAAGCAGAATGGAACCGCCTCTGCCTGAAGAATACTTTGGGAACTCACTTCATGCGGTGAGTGCATCTACTACAGCAGGGGAATTGCTTGAACATGATCTGGGCTGGGCAGCGTGGAAGTTTCACCTGGCAGTTGTGAACCATAACAATGGAGAAGTGCTTGAGTATCACAAAAAGTGGTTAAAGTCTCCAGTGATCTACCAACATGCTCGGTTCTTTGAACCGGACAGTGTAATGATGGGTAGTTCACCAAGATTCAACATGTATGGGAATGAGTTTGGAATGGGGAAAGCGGTGGCGGTTCTGAGTGGATATGCTAACAAATTTGATGGGAAAGTGACGTCATACCCAGGCCGTGAAGGAGGTGGAAGCATTGACTTGGAAATGTGTCTTTTTCCAGAATCAATGTGTGCGCTGGAGTCAGATCTAGAGTTCATGAATGCAGTTTCTGCATCTAATTAA 1386 0.4473 MNNTCSASVQIVSECFVKPHHHQTQDSTQVLNLTPWDLAMLSVHYIQKGLLFKKPQNQPQDFTKNLLHHLKHSLSLTLVHFYPLAGRFITHQTQDPPSYSISVDCVNSPGARFIHATADLTISDILSPVDTPPIVQAFFDHDRAVNHDGHHMSLLTIQVTELIDAVFIGCSMNHSLADGTSYWKFFNSWSDIFQSQLKEGKDFDVANIISHKPIHKRWFPQGCDPIINLPFKHPDEFICRFEAPKLRERIFHFSAESIAKLKAKANKESNTNKISSFQSLSALVWRCLTRARSLPHDRKTSCKLAMNNRSRMEPPLPEEYFGNSLHAVSASTTAGELLEHDLGWAAWKFHLAVVNHNNGEVLEYHKKWLKSPVIYQHARFFEPDSVMMGSSPRFNMYGNEFGMGKAVAVLSGYANKFDGKVTSYPGREGGGSIDLEMCLFPESMCALESDLEFMNAVSASN 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241912g00009 461 Gene3D - 8 227 IPR023213 -
Stsc241912g00009 461 Pfam Transferase family 8 454 - -
Stsc241912g00009 461 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 10 455 - -
Stsc241912g00009 461 FunFam Tryptamine hydroxycinnamoyl transferase 236 451 - -
Stsc241912g00009 461 Gene3D - 240 451 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241912g00009 Stsc-Chr241912 49647 51377 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241912g00009 9 448 Monolignol Biosynthesis Gene Families AT5G48930 25.551 9.12e-34 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241912g00009 - - gmx:100775661 667.151