Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241912g00008 ATGAGGAGTACTCGAGTGGTTGAGCGCATTTCAGAATGCTTCATCAAGCCACACCTCCCCACGAAGGAATCAACTCAATTCTGCCACTTAACACCCTGGGATATTGTCCCCTTGTCTATTCATTATATCCAGAAAGCCCTGCTTTTCATGAAACCACAAAACCAGCCACAAGATTTCACCCATAATCTGTTGCATAATCTCAAGCACTCCCTCTCTCTTACCCTTGTCCATTTCTATCCACTTGCAGGACGCCTTGTGACTCACCAAACTCAAAACCCTCCCTCTTATTCTGTCTCTGTTGATTGCATAAACTCTCCAGGAGCAAGATTCATCCATGCAACCTTAGACCTCAATGTATCCGATATCCTCTCTCCTGTCCATGTCCCACCCATTGTTCACTCGATTTTCGACCTCAATAAAGCAGTTAACCATGATGGTCACGCCATGCCTCTCTTGTCTGTCCAAATCACCGAGCTAATTGATGGTGTTTTCATAGGCTGTTCCATGAACCACTGTGTAGCTGATGGCACTTCTTATTGGAGCTTCTTCAACACATGGTCTGAGATATTTCAATCTCAGGCCAAAGGGGAAGATGTTAACGTTGTCAACATCTCTCACCAACCAATCCACAAGCGCTGGTTTCCAGAGAGTTGTGGTCCGCCAATTAATCTTCCCTTCAAACACTATGACGAGTTTATCTCTAGATACGAAGCACCCAAGCTGAGAGAAAGGATCTTCCACTTCACAGCTGATTCCATCGCGAAACTTAAAGCCCAAGCCAACAAAGATGATTCCAACAGCAGCGAAATCTCTTCGTTCCAATCGTTGTCAGCTCACGTTTGGAGAAGCATAACACGTGCTCGGAGCGTGCCAAGTGATGAAAGAAGCAGCTGCATAGTGGTAACAAACAACCGAACAAGAATGGAACCGCCTTTGCCACAGGAGTACTTCGGAAACTCAGTTAACTCTGTGGAGGCGGTTGCAACAGCAGGGGAGCTGGGAAAGCATGATCTGGGTTGGGCAGCGTGGAAGGTGCACGAAGCTGTTGCAAACTACAACCAAAGAGCGGTTATGGATTGGCTCAAAGAGTGGCTGCGATCTCCTGCTATTCATCAAACTGGTGGCTTTGTTGATCCGTACAGTGTGGTGATGAGCAGTTCTCCGAGGTTCAATGTTTATGGGAATGAATTTGGAATGGGGAAAGCCGTGGCGGTTCTGAGTGGATATGCTAATAAGTATGATGGCAAGGTGACGTCATATCCTGGGCGTGAAGGTGGGGGAAGCATTCAATTGGAGGTGTGTCTTTCTCCTCATACAATGAGCGCTTTGGAATCTGACCAACACTTCATGGATACGGTTACTCTGTTCAATCCCTCCCACTACCTCTAG 1389 0.4687 MRSTRVVERISECFIKPHLPTKESTQFCHLTPWDIVPLSIHYIQKALLFMKPQNQPQDFTHNLLHNLKHSLSLTLVHFYPLAGRLVTHQTQNPPSYSVSVDCINSPGARFIHATLDLNVSDILSPVHVPPIVHSIFDLNKAVNHDGHAMPLLSVQITELIDGVFIGCSMNHCVADGTSYWSFFNTWSEIFQSQAKGEDVNVVNISHQPIHKRWFPESCGPPINLPFKHYDEFISRYEAPKLRERIFHFTADSIAKLKAQANKDDSNSSEISSFQSLSAHVWRSITRARSVPSDERSSCIVVTNNRTRMEPPLPQEYFGNSVNSVEAVATAGELGKHDLGWAAWKVHEAVANYNQRAVMDWLKEWLRSPAIHQTGGFVDPYSVVMSSSPRFNVYGNEFGMGKAVAVLSGYANKYDGKVTSYPGREGGGSIQLEVCLSPHTMSALESDQHFMDTVTLFNPSHYL 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241912g00008 462 Gene3D - 8 219 IPR023213 -
Stsc241912g00008 462 FunFam Tryptamine hydroxycinnamoyl transferase 228 447 - -
Stsc241912g00008 462 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 10 450 - -
Stsc241912g00008 462 Gene3D - 233 446 IPR023213 -
Stsc241912g00008 462 Pfam Transferase family 7 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241912g00008 Stsc-Chr241912 47522 49029 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241912g00008 67 444 Monolignol Biosynthesis Gene Families AT5G48930 28.141 1.04e-37 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241912g00008 - - gmx:100775661 667.151