Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241911g00008 ATGGATCAGGTCGAATTATCCACCAATCAGGTTCTAAGGAGGGAAATGCCATGGGAAACATACATGTCTACGAAGCTCATCTCTGGCACAACCCTTCAGCTCTTAATACGTTACGATCACCGATCAGAGAGTTACAGAGCACATTTGCTTGATGATGAAGGTCCGACTTATGCTCGCGTCTTTGTTCATATCTTGCGTGATATTCACAAAGAAGATATTATAGAATATGTTTTGGCTTTGATTGATGAGATGTTGGCTGGAAACTGGTTCATACAAGAGAAAAGTTGTAAGATCCTTGCTTTGATGGTTAGTGCTAGGCCCAAAAATCAAAATGGTGTTGTATCAAATGGAAATGCACCAAAGAATCCATTCACCACTATTGATGATGTTTTGAAAGGACTGGTAAAATGGCTTTGTGAACAGCTCAAGAAGCCATCTCATCCCAATCGTGCAGTCCCAACTTCGATCAATTGTTTAGCAACTCTGCTTAAGGAACCTGTAGTTAGATCTTCCTTTGTTCAAGCAGATGGAGTCAAGTTACTTGTACCATTGATTTCCCCAGCATCCACCCAACAATCTATTCAGATAATCAATACTCTCTCTCAAACTCAAGCAAGCTCAAAAACCACCAAGGACACCACACGGCTAACACTTCCACTGCGAATACCACCACCATCTCACCATTGA 687 0.4148 MDQVELSTNQVLRREMPWETYMSTKLISGTTLQLLIRYDHRSESYRAHLLDDEGPTYARVFVHILRDIHKEDIIEYVLALIDEMLAGNWFIQEKSCKILALMVSARPKNQNGVVSNGNAPKNPFTTIDDVLKGLVKWLCEQLKKPSHPNRAVPTSINCLATLLKEPVVRSSFVQADGVKLLVPLISPASTQQSIQIINTLSQTQASSKTTKDTTRLTLPLRIPPPSHH 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241911g00008 228 MobiDBLite consensus disorder prediction 205 228 - -
Stsc241911g00008 228 SUPERFAMILY ARM repeat 8 195 IPR016024 -
Stsc241911g00008 228 Pfam V-ATPase subunit H 88 197 IPR004908 GO:0000221|GO:0046961|GO:1902600
Stsc241911g00008 228 Pfam V-ATPase subunit H 4 86 IPR004908 GO:0000221|GO:0046961|GO:1902600
Stsc241911g00008 228 Gene3D - 2 213 IPR011989 -
Stsc241911g00008 228 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 3 87 IPR004908 GO:0000221|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241911g00008 Stsc-Chr241911 38731 41768 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241911g00008 1 197 Primary Pumps ATPases(2) AT3G42050 61.062 8.55e-91 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241911g00008 K02144 - gmx:100788723 315.079