Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241907g00002 ATGAAGCAGTTGATCCGGAGACTCTCACGCGTCGCCGACTCTTCTCAGTACACGCTCCTCCGCTCCGACTCCGTTGCGGCGGCGGCGGCAAGGCGTCACCGCCGGCGCTGTGGGGACTCCTTCCGGCAGAAGATGCGGCGCTCTACGGCGGTGCCGGAGGGACACGTTCCCGTGTACGTCGGCGACGAGATGGAGCGGTTTGCGGTGAGTGCGGAGCTTCTTAACCACCCGATCTTCGTGAAGCTTCTGAACGAGTCGGCTCAGGAGTACGGTTACGACCAGCAAGGTGTTATCCGGCTACCGTGCCACGTCATCGTCTTCCAGCGCGTGCTTGAAGCACTCACTGTTGGACGCGACACGCGCCACCTCTTCGACCTCCTCAACTACTCCCCTGAAGAGTTGTTGACACACTGA 414 0.6159 MKQLIRRLSRVADSSQYTLLRSDSVAAAAARRHRRRCGDSFRQKMRRSTAVPEGHVPVYVGDEMERFAVSAELLNHPIFVKLLNESAQEYGYDQQGVIRLPCHVIVFQRVLEALTVGRDTRHLFDLLNYSPEELLTH 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241907g00002 137 Pfam Auxin responsive protein 9 114 IPR003676 GO:0009733
Stsc241907g00002 137 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 42 110 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241907g00002 Stsc-Chr241907 8611 9024 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241907g00002 48 137 Calmodulin-binding Proteins AT4G31320 33.333 1.35e-16 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241907g00002 K14488 - gmx:100793103 184.496