Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241903g00012 ATGGCAACAGAAAAGAAGAAAATATGTGTAACTGGTGCGGGAGGTTTCTTAGCTTCTTGGGTTGTTCAGCTGCTTCTTTCCAAAGGATACATCGTTCATGGCACTGTTAGACAACCTGGTGATGAGAAATATGCTCACTTGATGAAGCTTGAGGGAGCTTCTGAGAACCTTAAACTCTTCAAAGCAGATTTGTTGAATTATGAATCAGTTCAATCAGCAATTGTTGGATGCAATGCTGTTTTCCATGTTGCTTGCCCTGTGCCTTCAACAACTTCTACCAACCCTGAGGTGGAAGTGATTGAACCCGCCGTCAAGGGAACTACCAATGTGCTTGAAGCTTCCCTTGAAGCTAAAGTGGAACGAGTTGTCTATGTGTCATCTGGAGGGGCTGTTTTCATGAACCCAAATTTGCCAAATGGCAAAGTGATTGATGAGTCTTGTTGGTCTGATAAAGACTATTGCAGAAAATCCAATAACTGGTATTGCTTCTCCAAGACGGAGGCAGAAGAGCAGGCCCTAGACTTTGCTAAAAGAACCGGGCTTGATGTGGTGAGCGTTTGTCCTACCCTTGTGCTGGGACCGATTTTGCGGTCCTCTATTGTGAATGCAAGTAGCTTGGTTCTCCTCAAGATTTTGAAAGGTTGTGAATCATTGGAGAACAGACATCGTTGGATAGTTGACGTGCGAGATGTAGCCGATGCAATTCTTTTGGCTTATGAAAAGCCTGAAGCAGAAGGGAGATATATATGCACTTCACACCCGGTTATGGCAAAGGAGTTGGTGGAGAAATTGAAGAATAAGTATCCAAACTACAACTACCCTACAAAGTAA 831 0.4356 MATEKKKICVTGAGGFLASWVVQLLLSKGYIVHGTVRQPGDEKYAHLMKLEGASENLKLFKADLLNYESVQSAIVGCNAVFHVACPVPSTTSTNPEVEVIEPAVKGTTNVLEASLEAKVERVVYVSSGGAVFMNPNLPNGKVIDESCWSDKDYCRKSNNWYCFSKTEAEEQALDFAKRTGLDVVSVCPTLVLGPILRSSIVNASSLVLLKILKGCESLENRHRWIVDVRDVADAILLAYEKPEAEGRYICTSHPVMAKELVEKLKNKYPNYNYPTK 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241903g00012 276 Pfam NAD dependent epimerase/dehydratase family 8 245 IPR001509 -
Stsc241903g00012 276 FunFam Dihydroflavonol reductase 5 276 - -
Stsc241903g00012 276 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 274 IPR036291 -
Stsc241903g00012 276 Gene3D - 1 276 - -
Stsc241903g00012 276 CDD FR_SDR_e 9 276 - -
Stsc241903g00012 276 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 7 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241903g00012 Stsc-Chr241903 34026 36807 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241903g00012 5 276 Monolignol Biosynthesis Gene Families AT2G33590 65.568 4.97e-128 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241903g00012 - - lja:Lj3g3v2171530.3 432.565