Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241903g00011 ATGGCAACAGAAAAGAAGAAAATATGTGTAACTGGTGCGGGAGGTTTCTTAGCTTCTTGGGTTGTTCAGCTGCTTCTTTCCAAAGGATACATCGTTCATGGCACTGTTAGACAACCTGGTGATGAGAAATATGCTCACTTGATGAAGCTTGAGGGAGCTTCTGAGAACCTTAAACTCTTCAAAGCAGATTTGTTGAATTATGAATCAGTTCAATCAGCAATTGTTGGATGCAATGCTGTTTTCCATGTTGCTTGCCCTGTGCCTTCAACAACTTCTACCAACCCTGAGGTGGAAGTGATTGAACCCGCCGTCAAGGGAACTACCAATGTGCTTGAAGCTTCCCTTGAAGCTAAAGTGGAACGAGTTGTCTATGTGTCATCTGGAGGGGCTGTTTTCATGAACCCAAATTTGCCAAATGGCAAAGTGATTGATGAGTCTTGTTGGTCTGATAAAGACTATTGCAGAAAATCCAATAACTGGTATTGCTTCTCCAAGACGGAGGCAGAAGAGCAGGCCCTAGACTTTGCTAAAAGAACCGGGCTTGATGTGGTGAGCGTTTGTCCTACCCTTGTGCTGGGACCGATTTTGCGGTCCTCTATTGTGAATGCAAGTAGCTTGGTTCTCCTCAAGATTTTGAAAGGTTGTGAATCATTGGAGAACAGACATCGTTGGATAGTTGACGTGCGAGATGTAGCCGATGCAATTCTTTTGGCTTATGAAAAGCCTGAAGCAGAAGGGAGATATATATGCACTTCACACCCGGTTATGGCAAAGGAGTTGGTGGAGAAATTGAAGAATAAGTATCCAAACTACAACTACCCTACAAACTTTATTGAGGTTGATGATCATCAAACAAAGTTAATCCCAGAGAAACTACAGAGGCTTGGTTGGAGATACAGGCCATTGGAGGAGACACTCACTGATTCTGTTGAGAGCTACAAGGAAGCTGGTCTCTTGGAATCAAAATAG 969 0.4345 MATEKKKICVTGAGGFLASWVVQLLLSKGYIVHGTVRQPGDEKYAHLMKLEGASENLKLFKADLLNYESVQSAIVGCNAVFHVACPVPSTTSTNPEVEVIEPAVKGTTNVLEASLEAKVERVVYVSSGGAVFMNPNLPNGKVIDESCWSDKDYCRKSNNWYCFSKTEAEEQALDFAKRTGLDVVSVCPTLVLGPILRSSIVNASSLVLLKILKGCESLENRHRWIVDVRDVADAILLAYEKPEAEGRYICTSHPVMAKELVEKLKNKYPNYNYPTNFIEVDDHQTKLIPEKLQRLGWRYRPLEETLTDSVESYKEAGLLESK 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241903g00011 322 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 7 310 - -
Stsc241903g00011 322 Gene3D - 1 322 - -
Stsc241903g00011 322 Pfam NAD dependent epimerase/dehydratase family 8 245 IPR001509 -
Stsc241903g00011 322 FunFam NAD(P)-binding Rossmann-fold superfamily protein 1 320 - -
Stsc241903g00011 322 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 314 IPR036291 -
Stsc241903g00011 322 CDD FR_SDR_e 9 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241903g00011 Stsc-Chr241903 34026 36807 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241903g00011 5 320 Monolignol Biosynthesis Gene Families AT2G33590 64.353 4.51e-147 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241903g00011 - - gmx:100784817 471.085