Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241903g00008 ATGGCGATGGTAGCTTCCGCGACGGCGAATAAGAAGGTATGCGTGACCGGTGCCGGTGGTTTCATAGCTTCATGGCTTGTTAAGCTTCTCCTTTCCAAAGGATACATCGTTCATGGCACTGTTAGAAAACCTGGTGATGAGAAATATAGTCACTTGATGAAGTTTGAGGGAGCTTCTGAGAATCTAAAACTGTTCAAAGCTGATTTGTTGAGTTATGAATCCATTTACTCAGCAGTTGTTGGATGCAGTGCAGTTTTCCATGTTGCTTGCCCTGTACCAGCAATAGCAGCAACTTTCCAAAATCCTGAGGCATGCATCTCATTTTATTCACATTCAGTTGAACTTTAA 348 0.4282 MAMVASATANKKVCVTGAGGFIASWLVKLLLSKGYIVHGTVRKPGDEKYSHLMKFEGASENLKLFKADLLSYESIYSAVVGCSAVFHVACPVPAIAATFQNPEACISFYSHSVEL 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241903g00008 115 Gene3D - 3 111 - -
Stsc241903g00008 115 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 105 IPR036291 -
Stsc241903g00008 115 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 12 105 - -
Stsc241903g00008 115 Pfam NAD dependent epimerase/dehydratase family 13 106 IPR001509 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241903g00008 Stsc-Chr241903 27958 28435 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241903g00008 12 103 Monolignol Biosynthesis Gene Families AT2G33590 68.478 6.24e-40 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241903g00008 - - adu:107463733 182.956