Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241903g00007 ATGGTTGAGCCTGCTGTGAAGGGAACTAGTAATGTTCTGGAAGCTTCTCTTGAAGCTAAAGTGGAGAGAGTTGTTTATGTTTCATCCTCAACTGCTATTATCAATATCCAGAATTTGCCTAATGATAAAGTGATTGATGAATCATATTGGTCTGATAAAGAATACTGCAGAGAAAACAAGAAATGGTATCCCTTTTCAAAGACAGAAGCGGAAGAGCAGGCACTGGATTTTGCAGAAAGAAACGGGATTGATCTTGTGAGAATTTGTCCTACTGTTGTGTTGGGGCCAATTTTGCAGTCAACTTCTGTGAATGCAACTAGCTTGTTTCTCCTCAACCTTCTTAAAGGCTGTGAGCCAGTGGAGAATAAGGTTAGGTGGATAGTAGATGTAAGAGATTTAGCAGATGCATTACTATTGGCTTATGAAAAGATTGAAGCACAAGGGAGATACATATGCACTTCATGCCCTGCTAAGCCAAAGGATTTGGTACACAAATTGAAGAGCTTATATCCAAATTACAACTACCTTACAGAGTTTATTGAGGTGGATTATTACATAAGGTTGAGCTCTGAGAAACTAGAGAGACTTGGTTGGAGATGCAGGTCATTAGAGAAGACACTCATTGATTCTGTTGAGAGCTTTAAGGAGGCTGGTCTCTTAGAATCCAAGTAA 672 0.3943 MVEPAVKGTSNVLEASLEAKVERVVYVSSSTAIINIQNLPNDKVIDESYWSDKEYCRENKKWYPFSKTEAEEQALDFAERNGIDLVRICPTVVLGPILQSTSVNATSLFLLNLLKGCEPVENKVRWIVDVRDLADALLLAYEKIEAQGRYICTSCPAKPKDLVHKLKSLYPNYNYLTEFIEVDYYIRLSSEKLERLGWRCRSLEKTLIDSVESFKEAGLLESK 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241903g00007 223 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 1 211 - -
Stsc241903g00007 223 Pfam NAD dependent epimerase/dehydratase family 5 146 IPR001509 -
Stsc241903g00007 223 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 215 IPR036291 -
Stsc241903g00007 223 Gene3D - 1 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241903g00007 Stsc-Chr241903 26162 27728 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241903g00007 1 221 Monolignol Biosynthesis Gene Families AT2G33590 51.802 3.56e-74 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241903g00007 - - adu:107463733 347.051