Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241900g00002 ATGGCTAGAACGTACAAAGGACATGCAGTTGGAATTGACCTTGGCACAACGTACTCTTGTGTTGGCGTATGGCAGGAGCAACATTGTCGTGTGGAGATCATTCATAATGACCAGGGCAACAGAACAACACCTTCCTACGTTGCTTTCACTGCGAATCAAAGGTTTATTGGAGATGCTGCTAAGAACCAGGCTGCAGCTAACCCAACTAACACTGTCTTTGATGCTAAGAGATTGATCGGTAGAAAATATAGTGATCCGACTGTTAAGAATGATATGCTGATGTGGCCATTTAAGGTCACTGCTGGTGCTGATGATAAACCAATGATTGTTGTTACATACAAGGATCAAGAGAAGAGATTTTCTGCAGAAGAAATTTCATCTATGGTTCTCACTAAGATGCGAGAGATTGCAGAGGCATTCTTAGAGTCACCTGTTTGTAACGCTGTTATTAAGTACCTGCTTATTTCAGTGGCTCTCAGCGCGAAGCTACCAGAGATGCTGGCGCCATTGCAGGTCTCAACGTGA 525 0.4381 MARTYKGHAVGIDLGTTYSCVGVWQEQHCRVEIIHNDQGNRTTPSYVAFTANQRFIGDAAKNQAAANPTNTVFDAKRLIGRKYSDPTVKNDMLMWPFKVTAGADDKPMIVVTYKDQEKRFSAEEISSMVLTKMREIAEAFLESPVCNAVIKYLLISVALSAKLPEMLAPLQVST 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241900g00002 174 Gene3D - 73 124 - -
Stsc241900g00002 174 Gene3D - 5 152 - -
Stsc241900g00002 174 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Stsc241900g00002 174 Pfam Hsp70 protein 9 150 IPR013126 GO:0005524|GO:0140662
Stsc241900g00002 174 FunFam heat shock 70 kDa protein-like 73 128 - -
Stsc241900g00002 174 PANTHER HEAT SHOCK PROTEIN 70KDA 9 151 IPR013126 GO:0005524|GO:0140662
Stsc241900g00002 174 SUPERFAMILY Actin-like ATPase domain 9 150 IPR043129 -
Stsc241900g00002 174 PRINTS 70kDa heat shock protein signature 8 21 - -
Stsc241900g00002 174 PRINTS 70kDa heat shock protein signature 38 50 - -
Stsc241900g00002 174 PRINTS 70kDa heat shock protein signature 60 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241900g00002 Stsc-Chr241900 941 1687 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241900g00002 1 150 Calmodulin-binding Proteins AT3G12580 75.333 1.02e-74 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241900g00002 K03283 - vvo:131625172 237.269