Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241900g00001 ATGAGCCAACCGCTGCGGCCATTGCGTATGGCCTTGACAAAAGATCTGGTTGCGCCAAGGAGCGTAATGTGTTCATCTTTGATCTTGGTGGGGGTACCTTTGATGTGTCTCTCCTTACTATTAAGGACAAGGTCTTCAAAGTTAAGGCTACTGCTGGATTTTGATAACAGACTAGTGACTTACTTTGTTAAGGAATTCCAAAGGAAGTACAAAGTTGACATTAATGGCAATGCCAGAGCCTTAAGGAGATTGAGAACTGCTTGTGAGAAGGCCAAGAGGACCGTATCTTACGCAGTAACAGCCTCCATTGAATTAGATGCTTTCCTTGACGGAATTGACTTCTATTCATCAATCATGCGTGCTAGATTTGAAGAACTTAATATGGACCTCTTTAGAGAGTGCGTGGAAACGGTAGATCAATGCTTGAATGATGCGAAAATGGACAAGGCAAGTGTACATGATGTGGTGCTTGTTGGTGGTTCTTCAAGGATTCCCAAAGTGCAGGAGTTGTTGCAAGAATTTTTTGAAGGAAAGAAGCTTTTTAAGAGCATCAATCCTGACGAAGCTGTTGCTTATGGTGCAGCTGTTCAGGCTGCTCTGTTGAATGGAGGCACTAAGAGTAATGTCCCAGATTTAGTGCTGCAGGATGTTACTCCTCTGTCCCTTGGTATTGAGCTATTAGGAGATGTCATGAGCGTTGAGATTCCAAGGAATACTACCATTCCTGTAAAGAAGTCCGCGACTGTAGTGACTGCCTTTGACAACCATTCATCTATGTCTATAAAGATTTACGAGGGTGAAAGAGCAAGAGCCAGTGATAACAACTTGCTCG 832 0.4339 MSQPLRPLRMALTKDLVAPRSVMCSSLILVGVPLMCLSLLLRTRSSKLRLLLDFDNRLVTYFVKEFQRKYKVDINGNARALRRLRTACEKAKRTVSYAVTASIELDAFLDGIDFYSSIMRARFEELNMDLFRECVETVDQCLNDAKMDKASVHDVVLVGGSSRIPKVQELLQEFFEGKKLFKSINPDEAVAYGAAVQAALLNGGTKSNVPDLVLQDVTPLSLGIELLGDVMSVEIPRNTTIPVKKSATVVTAFDNHSSMSIKIYEGERARASDNNLL 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241900g00001 277 FunFam heat shock 70 kDa protein-like 117 203 - -
Stsc241900g00001 277 FunFam Heat shock 70 kDa 52 133 - -
Stsc241900g00001 277 Gene3D - 134 181 - -
Stsc241900g00001 277 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 199 277 IPR029047 -
Stsc241900g00001 277 PANTHER HEAT SHOCK PROTEIN 70KDA 53 277 IPR013126 GO:0005524|GO:0140662
Stsc241900g00001 277 Gene3D Actin; Chain A, domain 4 53 133 - -
Stsc241900g00001 277 Pfam Hsp70 protein 53 277 IPR013126 GO:0005524|GO:0140662
Stsc241900g00001 277 SUPERFAMILY Actin-like ATPase domain 53 201 IPR043129 -
Stsc241900g00001 277 Gene3D - 182 198 - -
Stsc241900g00001 277 PRINTS 70kDa heat shock protein signature 211 230 - -
Stsc241900g00001 277 PRINTS 70kDa heat shock protein signature 184 204 - -
Stsc241900g00001 277 PRINTS 70kDa heat shock protein signature 152 168 - -
Stsc241900g00001 277 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 208 277 IPR029047 -
Stsc241900g00001 277 ProSitePatterns Heat shock hsp70 proteins family signature 3. 155 169 IPR018181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241900g00001 Stsc-Chr241900 97 928 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241900g00001 53 277 Calmodulin-binding Proteins AT3G12580 68.444 1.63e-107 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241900g00001 K03283 - gmx:102667572 327.02