Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241899g00005 ATGCAAAACTCAGTTCCTGCTATCACTTTCATCTTGGCCTTAACTTTAAGACTTGAGAAAGTGAACATGACAAGGAGAAATGGATTAGCAAAAGCTATAGGAACCATTGCAAGTGTTGGTGGTGCCACCATTATTATTCTATACAAAGGTCCTCCTCTTCTTCACCAAACACATGGAAGCAGAAGCACCTTACAAGGAGATCATAATTCTGAAGAAATGCAGCAAAATTGGAGATGGGGTTGCATATACTTGCTTGGAAAATGTTTTTCATGGGCTGGTTGGATGGTTTTTCAGGCTCCTGTGGTGAAGAAGTATCCGAAGAAGTATCCGGCGAAACTATCGCTCACGGCGTTCACATGCTTCTTCGGATTGATCCAATTCTTGATCATAGCAGCATTTGTAGAAACTGACTTACAAAATTGGAAGATAGTATCATTGTAG 441 0.4059 MQNSVPAITFILALTLRLEKVNMTRRNGLAKAIGTIASVGGATIIILYKGPPLLHQTHGSRSTLQGDHNSEEMQQNWRWGCIYLLGKCFSWAGWMVFQAPVVKKYPKKYPAKLSLTAFTCFFGLIQFLIIAAFVETDLQNWKIVSL 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241899g00005 146 PANTHER WAT1-RELATED PROTEIN 1 143 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241899g00005 Stsc-Chr241899 38642 40119 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241899g00005 1 145 Nodulin-like Gene Family AT3G18200 57.534 3.58e-54 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241899g00005 - - qsa:O6P43_005135 213.772