Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241894g00003 ATGTGCGCATGGAATTCTACCGGAGTGATCTGGTACGATGAATGCATGGTTAGGTACTCCAACGAAAATTTCTTTGGGAAGGTGCAAATTAAGCCATTAACATTCATTTGGAACACTGACAAAAACAATAGAACTTCACCTTTTGAAAATCATCTTGATGCGCAAGCAGTGATGTACCGATTAATAAAACAATTGGACAACGATGACTCAGATAGGAATATGTTGTTCAACTCAAGGAAACCTGATGTGAATAATGAGTATGAGGGATATGGGTTTGTGCAATGTACAAGAGATATAAATCGGTCTTTATGTGCGTCTTGTTTGTGTCAGTTGATGGACAAAACAAAAGATTGTTGCCGAAGCAGAATTGGGTGGCGCTTACTAGCTCCTTCTTGCAATATTAGGTACGAGAAGTATATCTTCTATGAGGATAGTTTAGAGCCGCTAGTATCACCTACACCTAAACCGCAACTACCATCTGAAGTACCACCATATAATAGAAAGCACTTTCGAAAATTCCCTATAATCAACATGGTCATTCCAGTTACAAGTGTTGCCCTCCTTTTCTATCTTATCTGGTGTTTAACTCAACTCCGGGAAAGACGACAACAAGGGGAAGGGATTACTGACGTAATTCGAGTAAACAATTTGAAAAGTTCAATTAGTTCATGCTTTAAGGGTCAAGGAATGAATGTTACACACGAAGACAACAAAGGAGAAGTACAGTATTTTAGTTTGAGCACGATTAAGGTTGCTACCAACAGTTTTTCTGATGACACTAAGCTAGGTGAAGGGGGCTTTGGGCCCGTTTTCAAGGGGAAGTTAAGTGATGGCAAGGAAATAGCAGTTAAAAGGCTTTCATTCAAATCAAGGCAAGGACTTGAAGAATTCAAGAATGAAGTGACGTTGATTGCAAAGCTTCAACACAAAAATCTTGTTAGGCTCTTGGGATGCTGCCTTGATAGAAATGAGAAGCTTCTTGTATATGAGTACATGGTCAACACTAGTCTTGATGCTTTTTTATTTGGTTAG 1032 0.3905 MCAWNSTGVIWYDECMVRYSNENFFGKVQIKPLTFIWNTDKNNRTSPFENHLDAQAVMYRLIKQLDNDDSDRNMLFNSRKPDVNNEYEGYGFVQCTRDINRSLCASCLCQLMDKTKDCCRSRIGWRLLAPSCNIRYEKYIFYEDSLEPLVSPTPKPQLPSEVPPYNRKHFRKFPIINMVIPVTSVALLFYLIWCLTQLRERRQQGEGITDVIRVNNLKSSISSCFKGQGMNVTHEDNKGEVQYFSLSTIKVATNSFSDDTKLGEGGFGPVFKGKLSDGKEIAVKRLSFKSRQGLEEFKNEVTLIAKLQHKNLVRLLGCCLDRNEKLLVYEYMVNTSLDAFLFG 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241894g00003 343 Gene3D - 33 141 IPR038408 -
Stsc241894g00003 343 SUPERFAMILY Protein kinase-like (PK-like) 236 342 IPR011009 -
Stsc241894g00003 343 Pfam Salt stress response/antifungal 41 139 IPR002902 -
Stsc241894g00003 343 ProSiteProfiles Gnk2-homologous domain profile. 36 141 IPR002902 -
Stsc241894g00003 343 Pfam Protein tyrosine and serine/threonine kinase 260 341 IPR001245 GO:0004672|GO:0006468
Stsc241894g00003 343 ProSiteProfiles Protein kinase domain profile. 256 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241894g00003 343 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 63 342 - -
Stsc241894g00003 343 Gene3D Phosphorylase Kinase; domain 1 230 331 - -
Stsc241894g00003 343 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 222 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241894g00003 Stsc-Chr241894 24243 27496 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241894g00003 2 342 Receptor kinase-like Gene Family AT4G05200 38.109 1.07e-63 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc241894g00003 Stress-antifung 5e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241894g00003 - - aip:107640338 454.521