Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241894g00001 AGACTCATCACCACAGGACAAGGCTGTTATTGTTACTTTGGCTGCGAAGGGGACAGTCATCTCAGTCAACAACAGAGCACGAACATAGAGAAAGAGCAAACGCCACATGCAGATAGCGCAAAAGCCACACACACAGAGCACCAAAACAAAATTGAGAAAAAGCAAGAGGGAGGCGCAACTTACCATCGTTTCTCGTCGATTCACATGGAAGACGTCCTGCGAGAGTTGGCGAAAGACGTCCTGCGAGAGTTGGCAATCACGAACGCGCTTCCCAATCACCCGAACGTGGTGAAGCTAAGGGCGACTTACGAGGACGATGAGAACATTCACCTCGTGATGGAGTTTTGTGATGGCGACAAGCTTTTTGATAGGCGAGAGAACGGCGAGCTTTTTGATTGCCTCTATTTCTCTTCTCCCTCATTTTTGATTCTCTCTCCTCCCTTTTCCAATGTTTCATTATTGGTTATTGTGCCTGGTATTATTTCCATATTGGGGAAAATTATCACATGTTCCGTGCCAAAAATTTCAGTTGCCAATAAGCCTTTTGTCGATTAG 555 0.4595 RLITTGQGCYCYFGCEGDSHLSQQQSTNIEKEQTPHADSAKATHTEHQNKIEKKQEGGATYHRFSSIHMEDVLRELAKDVLRELAITNALPNHPNVVKLRATYEDDENIHLVMEFCDGDKLFDRRENGELFDCLYFSSPSFLILSPPFSNVSLLVIVPGIISILGKIITCSVPKISVANKPFVD 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241894g00001 184 Gene3D Phosphorylase Kinase; domain 1 39 124 - -
Stsc241894g00001 184 PANTHER SERINE/THREONINE-PROTEIN KINASE 42 126 - -
Stsc241894g00001 184 SUPERFAMILY Protein kinase-like (PK-like) 74 130 IPR011009 -
Stsc241894g00001 184 ProSiteProfiles Protein kinase domain profile. 1 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241894g00001 184 MobiDBLite consensus disorder prediction 24 59 - -
Stsc241894g00001 184 MobiDBLite consensus disorder prediction 34 59 - -
Stsc241894g00001 184 Pfam Protein kinase domain 77 127 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241894g00001 Stsc-Chr241894 5807 6362 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241894g00001 78 124 EF-hand Containing Proteins AT1G18890 68.085 8.65e-17 75.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Stsc241894g00001 Pkinase 9.6e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241894g00001 K13412 - pvy:116134723 76.6405