Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241891g00002 ATGGCGTCGTTGCTCAATGAAATTCAGAGATGTATGAGGCAAGCACATGTATGGAAGCTTGTTGGTCTGGCTTCAACAACAGTTGGACTATCATGTTATGCTCTCAGCTCCTCCTTTAACCGTCTCTTTGGAAGCTGGAACTTTCTGAAAATCTTTATCTATATTCTTTCCAGTGTCATCATTTGTTTCTTGATTTTATCTGCAAAGCGATGGCAATGCTCAACCACTTTGCGATTCAAAGCTCATCTGTCTTTTCTGGCTTTGACAATAACTGCCATCTATTCGTTTTTCCTGGATAAAGATGTGAACGGAAAACCAGATGTTTGCAGCCTAATTTCTTGTGCTTCCTTTGCAGTTATGTCTCTTTGCTTGTCGAAGCAGATACACTTCGGATTTGAAGTGGATCTATTGTATTTCTTCTTGGGAGCTTTGATAGTACAACTCATGAAAATACATTTGTTTTTAGTTGTGCAAGTTGACTCAGATTCCCAGCAACAATTCATAGCTTGTATGGAGGCTCTCAAGTCATGTGATTGGGAGCTAATGAATATGCTATCCAATTATGCAAAAGATTACATCAAGAACCTCCTTGAATCCAACTATCATCAGGACCATGTCTTGGTTGACGCCAACCAGGTGATTGATGCGCTGCCATTAAACATCATCAATGACCTTCAAGAAGCAGTGAAGTTCATGCTGGCTAATGGATTTGAGAAGGAGTGCTGCGATTTGTACAGCAGTAGCCGAAGTGAATACATAGAAAATTTCGTATCCAATTTAGTGTTTAAACTGCCAGATATTGTGAATGTTGCTGAGGTTGAATCAATTGCTCTTGAATTTGAAGTTCGGAATTGGATTAGCACTTCCAATTTAGCTTTGAGGTTCTTGTTTCCCAATGAAAGAAGACTATGCCAGCGTATCTTCTTGGGCTTCACCTCGGTTGCAGATACCGTATTCACTGAAATTTGCAGGGAATTCACGATACGTCAGTTAAATTTTGCAGATTGCTTTACATTTGAGAGCTCTAACTTCAAGACATTTGAAGTTTTTCCCATGAGCGTAAAAGTATTCATGGCATTGCATGACTTGATTCCAGAGTATGAATCATTGTTTTCCGAACAATTGTGTGATTCAATTAGAAATGAAGCTATCAACACTTGGAAGAGACTGGGAAAAGCAACCAAAGGGATTTTCATGGAGTTGGAAGATTGGATTTGCAATGATAAAACCATATCAGATGTTCCTGGGAGCCTTTATCCAATCTGCAGCAAAGTGATAGAGTGCCTTAATGCTGTCTATAAAGCTTGGGTCATCCTTCCCCTTGAGAATTTTTTCGAAGAGCACCCAATGGTTGTTTACAGGAAGGGAAGCCCTTCTTCATTCTTTATCCAGTTGATTAGGATAACAGAGCTTCTAGAGACACATTTGGAAGTCAAGTTCAAAAGCTGCCCGGACCGTGCTCTGCGCTACATTATAGCAATGAATAATATAAGGCACGTTGAACAGAATGCAAGGAAATGGAATTCGGAAACAAGACCTATGTATAATAGTGGCATGATTAGAAAATTGAATGCAAAATTCAGACAAAACCTCGAAGACTATCTAAAAGTGTCATGGGATGAGGTTATTGGGCTTTTGAAGCTGGGCAATAATGAATCATATTCTGTGGAATGTATGAAAGAAAATCTCAAATTGTTCAACTTGCACTTAAAGGAAATATGCAGAGTTCAGTCTACATGGTTTGTCCTTGATAAGAGGCTAAGAAAAGAAATAAGAGAGTCCATAAATAATGTGTTGTTGCCAATATATGGAGTCTTCATTGGAAAGTTATATAATGTTCTTGGTTCACATGCCAATGAATATATTGAGTACTCAATGCTTGACATCGATGCTCTGCTCAATGATTTGTTTCGAGCATAA 1920 0.387 MASLLNEIQRCMRQAHVWKLVGLASTTVGLSCYALSSSFNRLFGSWNFLKIFIYILSSVIICFLILSAKRWQCSTTLRFKAHLSFLALTITAIYSFFLDKDVNGKPDVCSLISCASFAVMSLCLSKQIHFGFEVDLLYFFLGALIVQLMKIHLFLVVQVDSDSQQQFIACMEALKSCDWELMNMLSNYAKDYIKNLLESNYHQDHVLVDANQVIDALPLNIINDLQEAVKFMLANGFEKECCDLYSSSRSEYIENFVSNLVFKLPDIVNVAEVESIALEFEVRNWISTSNLALRFLFPNERRLCQRIFLGFTSVADTVFTEICREFTIRQLNFADCFTFESSNFKTFEVFPMSVKVFMALHDLIPEYESLFSEQLCDSIRNEAINTWKRLGKATKGIFMELEDWICNDKTISDVPGSLYPICSKVIECLNAVYKAWVILPLENFFEEHPMVVYRKGSPSSFFIQLIRITELLETHLEVKFKSCPDRALRYIIAMNNIRHVEQNARKWNSETRPMYNSGMIRKLNAKFRQNLEDYLKVSWDEVIGLLKLGNNESYSVECMKENLKLFNLHLKEICRVQSTWFVLDKRLRKEIRESINNVLLPIYGVFIGKLYNVLGSHANEYIEYSMLDIDALLNDLFRA 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241891g00002 639 SUPERFAMILY Cullin repeat-like 165 637 IPR016159 -
Stsc241891g00002 639 PANTHER EXOCYST COMPLEX PROTEIN EXO70 175 637 IPR004140 GO:0000145|GO:0006887
Stsc241891g00002 639 Pfam Exo70 exocyst complex subunit 283 635 IPR046364 GO:0000145|GO:0005546|GO:0006887
Stsc241891g00002 639 Gene3D Exocyst complex component Exo70 155 639 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241891g00002 Stsc-Chr241891 6249 8267 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241891g00002 207 639 EXO70 exocyst subunit family AT5G58430 42.342 5.01e-102 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241891g00002 K07195 - aip:107607007 1001.12