Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241883g00006 ATGGCCAAGTATAGTTTTCTTCTTTTCTTATATGCTTATTTCATCATAAAATCCATAGCAAGCAGTGGTAATGATGATGATAATAGGAGTCTTCACATTATATACATGGGATCACTTCCAAAGGGAGATTATTCTCCAACCTCCCACCATCTTAGTATGCTGCAACAAACTACTAATAATGATGCAAAAAATCACATTGTTAGAAGTTATCACAGGAGTTTTAATGGTTTTGCTGCAATGATTACTGACCAACAAAGAGAAATGCTCTCAAAAATGGAAGGAGTCGTTTCTGTTTTCCCAAGCAGAACACTCCAACTACATACTACAAGATCTTGGGACTTCATGGGGTTCCAAGAATCAATACAGAGAAATAATACTGGTGAAAGTGATGTCATAATTGGAGTCATAGACACCGGAATATGGCCTGAATCAAAAAGCTTCAACGATGATGGTTTTGGTCCTATTCCGGAAAAGTGGAAAGGCGCATGTGAAGGCGGCAAAAACTTCACATGCAACAATAAAATCATCGGTGCAAGACACTATCTAAAAAGGATAGTGTCGGATGCCTCTGCAAGAGATTTTGATGGGCATGGAAGCCACACGGCGTCAACAGCGGCGGGGAATAGAGTTTCGGACGCAAGCTTTTATGGGATTGCTGGAGGAGTTGCAAGAGGAGGCGCCCCATCGGCAAGAATTGCTGTTTATAGAGTGTGTGACGCAGCATGTTCAGATGATGCTATATTGGCTGCTTTTGATGATTCCATTGCTGATGGTGTAGATGTCGTCACAATTTCAATGGGGCCAACTGTCCCAATTCCCTTTGATTCAAACAGCATAGCAATTGGATCTTTTCATGCAATGGAGAAAGGGATCCTCACCATAAATTCTGCAGGTAACTCTGGTCCTGAGAGTGAAACGACACATAGTTTGTCGCCTTGGATATTTAGTGTTGCAGCTAGCACCATGGATCGTAGAATTATAGATAAGGTCTTGCTTGGGAATGGATTAACACTCTCCGGAAAGTCAATAAACTCATTTTCATCAAATGGGAAAAAGATTCCATTGGTTTATGGAAAGATGGCTTCAAGATCGAATTGTTCAGATGAACGAGAAGCTGAAGGTTGTTATTCATATTGTTTGGATCCCAAACGCACAAAAGGGAAGATCCTCTTGTGTGATAATGAAGATGGATATGAATGGGCTTCTAAATTAGAGGCATTTGGCTCAATGGTGGTGTCTAACGAATTTGAAGCTCAAGTAGTTTCTTATCCTTCAATATCCATAGATTTAAAGACTTATGATCTTGCCAAGGCTTATGCAAATTCCAATACCACCCCTTATGCTGAAATATTCACTAGTGAAGACTTTAATAACACCATTGCTCCAATTATTGCCGATTTCTCTTCTCGAGGACCGAATTATGCAATCCCAGAGATTATGAAGCCAGACATCTGTGCTCCTGGTATAGAAATTTTGGCTGCTTATTCCCCAATTTCATCACCATCTGAAGAATCAACTGATAAAAGATCAGTGCAATACAACATACTTTCTGGAACTTCAATGGCATGCCCTCATGTTGCTGCCATAGCTGCATTTGTTAAGGTTTTTCATCCTGACTGGTCTCCGGCAGCTATAAAATCTTCTATCATGACGACTGCGAAGCCTATGAATGAAACCAATAAAGAAAAAGAATTTGCATATGGATCAGGATTTCTGGATCCAATTAGAGCCATAAATCCCGGACTAGTTTTTGATCTTTCCAAAGATGACCATGTGAATTTACTTTGCAGTATCGGGTACGACACCGCCAAAGTTCGACTAATATCAGGTGATAATAGCACTTCTTGCCCTTCATCATCATCTCAGTCAATGGCAAAAGATTTCAACTATCCTGCAATTGTGGCACGAGTGCAACAACAAAAACCATTTACGGTTAATTTCACAAGAACGGTAACCAATGTTGGGTTTGCTAATTCTACTTACAAGGCTCAAGTCCAACAACAACTCGGGATGAACATCACTGTTGTGCCCAATATACTTACATTTAAATCTGTTAAGGAGAAACAATCTTTTGTTGTTAATGTTGGAGGGAAATTAAATAGTAGTGAGGAAAGCGTAGTTTCATCTTCACTATTGTGTAGTGATGGAACACATAGTGTAAGAAAATATATAAGTTTGTTAGAAGTTATAGACTCCGGAATATGGCCTGAATCAAAAAGCTTCAACGATGATGGTTTTGGTCCTATTCCGAAAAAGTGGAAAGGCGCATGTGGAGGCGGCAAAAACTTCACATGCAACAATAAAATCATCGGTGCAAGACACTATCTAAACGAGAACGGCTCTGCAAGAGACGTTGTTGGGCATGGAAGCCACACAGCGTCAATTGCGGCAGGGAATAAAGTTTTGTTGAATCATGTTTTGCTTTTTGTATGA 2433 0.3995 MAKYSFLLFLYAYFIIKSIASSGNDDDNRSLHIIYMGSLPKGDYSPTSHHLSMLQQTTNNDAKNHIVRSYHRSFNGFAAMITDQQREMLSKMEGVVSVFPSRTLQLHTTRSWDFMGFQESIQRNNTGESDVIIGVIDTGIWPESKSFNDDGFGPIPEKWKGACEGGKNFTCNNKIIGARHYLKRIVSDASARDFDGHGSHTASTAAGNRVSDASFYGIAGGVARGGAPSARIAVYRVCDAACSDDAILAAFDDSIADGVDVVTISMGPTVPIPFDSNSIAIGSFHAMEKGILTINSAGNSGPESETTHSLSPWIFSVAASTMDRRIIDKVLLGNGLTLSGKSINSFSSNGKKIPLVYGKMASRSNCSDEREAEGCYSYCLDPKRTKGKILLCDNEDGYEWASKLEAFGSMVVSNEFEAQVVSYPSISIDLKTYDLAKAYANSNTTPYAEIFTSEDFNNTIAPIIADFSSRGPNYAIPEIMKPDICAPGIEILAAYSPISSPSEESTDKRSVQYNILSGTSMACPHVAAIAAFVKVFHPDWSPAAIKSSIMTTAKPMNETNKEKEFAYGSGFLDPIRAINPGLVFDLSKDDHVNLLCSIGYDTAKVRLISGDNSTSCPSSSSQSMAKDFNYPAIVARVQQQKPFTVNFTRTVTNVGFANSTYKAQVQQQLGMNITVVPNILTFKSVKEKQSFVVNVGGKLNSSEESVVSSSLLCSDGTHSVRKYISLLEVIDSGIWPESKSFNDDGFGPIPKKWKGACGGGKNFTCNNKIIGARHYLNENGSARDVVGHGSHTASIAAGNKVLLNHVLLFV 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241883g00006 810 PRINTS Subtilisin serine protease family (S8) signature 517 533 IPR015500 -
Stsc241883g00006 810 PRINTS Subtilisin serine protease family (S8) signature 128 147 IPR015500 -
Stsc241883g00006 810 PRINTS Subtilisin serine protease family (S8) signature 193 206 IPR015500 -
Stsc241883g00006 810 CDD Peptidases_S8_3 104 553 IPR034197 -
Stsc241883g00006 810 Gene3D - 595 726 - -
Stsc241883g00006 810 ProSiteProfiles Serine proteases, subtilase domain profile. 111 578 - -
Stsc241883g00006 810 Pfam Subtilase family 129 568 IPR000209 GO:0006508|GO:0008236
Stsc241883g00006 810 CDD PA_subtilisin_like 330 450 - -
Stsc241883g00006 810 ProSitePatterns Serine proteases, subtilase family, serine active site. 518 528 IPR023828 -
Stsc241883g00006 810 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 729 801 IPR045051 -
Stsc241883g00006 810 Gene3D - 323 457 - -
Stsc241883g00006 810 Pfam Peptidase inhibitor I9 33 107 IPR010259 -
Stsc241883g00006 810 Gene3D Peptidase S8/S53 domain 727 806 IPR036852 GO:0004252|GO:0006508
Stsc241883g00006 810 SUPERFAMILY Subtilisin-like 729 803 IPR036852 GO:0004252|GO:0006508
Stsc241883g00006 810 FunFam Subtilisin-like protease SBT1.5 130 333 - -
Stsc241883g00006 810 Gene3D Peptidase S8/S53 domain 130 590 IPR036852 GO:0004252|GO:0006508
Stsc241883g00006 810 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 16 107 IPR037045 -
Stsc241883g00006 810 SUPERFAMILY Subtilisin-like 106 582 IPR036852 GO:0004252|GO:0006508
Stsc241883g00006 810 Pfam Fibronectin type-III domain 627 724 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241883g00006 Stsc-Chr241883 19776 23751 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241883g00006 725 809 Subtilisin-like Serine Gene Family AT3G46850 62.921 3.63e-26 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241883g00006 - - qsa:O6P43_020996 817.764