LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc241883g00005	ATGGGATCACTTCCAAAAGGAGATTATTCTCCAACCTCCCACCATCTTAGTATGCTGCAACAAACTACTAATGATAACGATGCAAACAATCACATTGTTAGAAGTTATCATAGGAGTTTTAACGGTTTTGCTGCAATGATTACTGACCAACAAAGAGAAATGCTCTCAAAAATGGATGGAGTGGTTTCTGTTTTCCCAAGCAGAATGCTCCAACTACAAACTACAAGATCTTGGGACTTCATAGGATTCCAAGAATCGATACAGAGAAACAAAACTAGTGAGAGTGATGTTATAATCGGAGTCATGGACACCGGAATATGGCCAGAATCAGAAAGCTTCAACGATCGTGGTTTCGGTCCTATTCCGAAAAAGTGGAAAGGCGCATGCAAAGGCGGCAAAAACTTCACATGTAACAATAAAATCATCGGTGCAAGATATTATGTAAAAGGGCAAGACTCTGCAAGAGACATTCATGGGCATGGAACCCACACGGCGTCAACTGCGGCGGGGATTAGAGTTTCGGACGCAAGCTTCTATGGGATCGCCAAAGGAGTTGCAAGAGGAGGCGCCCCATCAGCAAGAATTGCTTCTTATAGTGTGTGTGCCAGCATAGGGTGCCCAGATCATGCAATATTGGCTGCTTTTGACGATGCCATCGCTGATGGTGTGGACCTCATCTCAATTTCGCTTGGGGGAGTTTCCCCGGTTCCCTTTGATACAGATATCATAGCAATTGGATCTTTTCATGCAATGGAAAAAGGGATTCTTACCATAAATTCTGCAGGTAACTCTGCACCTATATTTGTAACATTTAGTGTATCACCTTGGTTATTCAGTGTTGCAGCTACCACCATGGATCGTAGAATCATTGGTAAGGTTTTGCTTGGTAATGGATTAACACTCACGGGGAAGGGAATAAATGCTTTCGCATCCAATGGGACAAAGATTCCAGTAGTCCATGGAAAGTCAGCTTCACATCTAGATTGTCCATCAATTGAGGAAGCTGAATCATGTTCTGCTTCGTGTATGGATCCCAAACGAATAAAAGGGAATATCCTCTTTTGCAGACCTAGGGATGGCGATGTATCTTCAGCTACTGCATATGGTGAATTTGGCTTAGTTTTCATGTCTGATGGATTTTTGTCTATGGTAGTTCCTTCTCCTATATTAAATCTAGATTCAAAGGCTTATGATCTTGCTTTGGCTTATGCAAATTCCACTACTACCCCTGTTGCTGAAATTTTGAGTAGTGAAACCTTTATGAATGAAACTGCTCCCATTATTGCTGATTTCTCTTCTAGAGGACCTAATACTATTATCCCAGAAATTATGAAGCCGGACATAAGTGCTCCTGGTGTAGAAATTTTGGCTGCTTATTCACCTCTTGCACCACCATCTGGAAATTCAATTGATAAAAGATCAGTTAAATACAACATAGAATCTGGAACTTCAATGTCATGCCCTCATGTTGCTGGCATAGCTGCATTTGTTAAGGCTTTTCATCCTGATTGGTCTCCAGCAGCCATAAAGTCTTCTATCATGACAACTGCAAAACCAATGAATGAAACTTATGATAAAGACAGAGAATTTGCTTATGGATCAGGGTTTGTGGATCCAATTAGAGCCATAAATCCCGGTCTAGTTTTTGATCTTTCCCTAGATGATTATGTGAATTTACTTTGCAGCATCGGATATGACACAGCTAAAGTTCGACGGATATCTGGTAATAATAGCACTTCTTGCCTTTCACCATCTCTTCATCTGCCTAGGCCAAAAGATTTTAATTATCCTTCAATTGTGACTAAAGTTGAACCAAAGAAACCATTTATGGTTAATTTCACGAGAACAGTCACAAATGTTGGATTTGCTAACTCTACCTATACGGCTAGTGTCCAACAACATGCTGGCATGAACATCACTGTTGTGCCTAACATACTTAAGTTTAAATCTCTAAATGAGAAACAAACTTTTGTTGTTAATGTTGTTGGAGGGGGATTAAATGATATTGATAAAAGCTTAGTTTCATCGTCACTACTGTGGACCGATGGAACACATAATGTAAGGTCTCCAATTGTTGCATTTGTTTGA	2088	0.4033	MGSLPKGDYSPTSHHLSMLQQTTNDNDANNHIVRSYHRSFNGFAAMITDQQREMLSKMDGVVSVFPSRMLQLQTTRSWDFIGFQESIQRNKTSESDVIIGVMDTGIWPESESFNDRGFGPIPKKWKGACKGGKNFTCNNKIIGARYYVKGQDSARDIHGHGTHTASTAAGIRVSDASFYGIAKGVARGGAPSARIASYSVCASIGCPDHAILAAFDDAIADGVDLISISLGGVSPVPFDTDIIAIGSFHAMEKGILTINSAGNSAPIFVTFSVSPWLFSVAATTMDRRIIGKVLLGNGLTLTGKGINAFASNGTKIPVVHGKSASHLDCPSIEEAESCSASCMDPKRIKGNILFCRPRDGDVSSATAYGEFGLVFMSDGFLSMVVPSPILNLDSKAYDLALAYANSTTTPVAEILSSETFMNETAPIIADFSSRGPNTIIPEIMKPDISAPGVEILAAYSPLAPPSGNSIDKRSVKYNIESGTSMSCPHVAGIAAFVKAFHPDWSPAAIKSSIMTTAKPMNETYDKDREFAYGSGFVDPIRAINPGLVFDLSLDDYVNLLCSIGYDTAKVRRISGNNSTSCLSPSLHLPRPKDFNYPSIVTKVEPKKPFMVNFTRTVTNVGFANSTYTASVQQHAGMNITVVPNILKFKSLNEKQTFVVNVVGGGLNDIDKSLVSSSLLWTDGTHNVRSPIVAFV	695

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc241883g00005	695	Gene3D	-	286	421	-	-
	Stsc241883g00005	695	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	27	692	IPR045051	-
	Stsc241883g00005	695	ProSitePatterns	Serine proteases, subtilase family, serine active site.	482	492	IPR023828	-
	Stsc241883g00005	695	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	1	73	IPR037045	-
	Stsc241883g00005	695	SUPERFAMILY	Subtilisin-like	75	544	IPR036852	GO:0004252\|GO:0006508
	Stsc241883g00005	695	CDD	PA_subtilisin_like	293	414	-	-
	Stsc241883g00005	695	PRINTS	Subtilisin serine protease family (S8) signature	156	169	IPR015500	-
	Stsc241883g00005	695	PRINTS	Subtilisin serine protease family (S8) signature	94	113	IPR015500	-
	Stsc241883g00005	695	PRINTS	Subtilisin serine protease family (S8) signature	481	497	IPR015500	-
	Stsc241883g00005	695	Pfam	Fibronectin type-III domain	593	692	IPR041469	-
	Stsc241883g00005	695	Pfam	Peptidase inhibitor I9	11	72	IPR010259	-
	Stsc241883g00005	695	Gene3D	Peptidase S8/S53 domain	96	556	IPR036852	GO:0004252\|GO:0006508
	Stsc241883g00005	695	Pfam	Subtilase family	95	535	IPR000209	GO:0006508\|GO:0008236
	Stsc241883g00005	695	CDD	Peptidases_S8_3	70	517	IPR034197	-
	Stsc241883g00005	695	ProSiteProfiles	Serine proteases, subtilase domain profile.	77	543	-	-
	Stsc241883g00005	695	Gene3D	-	560	694	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc241883g00005	Stsc-Chr241883	16274	18361	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc241883g00005	1	694	Subtilisin-like Serine Gene Family	AT5G59100	51.206	0.0	713

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc241883g00005	-		-	qsa:O6P43_020998	773.081