Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241883g00003 ATGGCCAAGCATAGTGTTCTTCTTTTCTTATATGCTTATTTCATCATAAAATCCATAGCAAGCAGTGGTAATGATGATGATAATAAGAGTCTTCACATTATATACATGGGATCACTTCCAAAGGGAGATTATTCTCCAACCTCCCACCATCTTAGTATGCTGCAACAAACTACTAATAATGATGCAAAAAATCACATTGTTAGAAGTTATCACAGGAGTTTCAATGGTTTTGCTGCAATGATTACTGACCAACAAAGAGAAATGCTCTCAAAAATGGAAGGAGTGGTTTCTGTTTTCCCAAGCAGAACACTCCAACTACAAACTACAAGATCTTGGGACTTCATGGGGTTCCAAGAATCGATACAGAGAAACAGTGCTGGTGAGAGTGATGTTATAATCGGAGTTATAGACAGCGGAATATGGCCAGAATCCGAAAGCTTCAACGATCATGGTTTCAGTCAAATTCCAAAAAAGTGGAAAGGCGCATGCGAAGGCGGCAAAAACTTCACATGCAACAATAAAATCATTGGTGCACGACACTATCTAACAGAGGAAGACTCTGCAAGAGACGTTGTTGGGCATGGAACCCACACTGCGTCAACTGCAGCGGGGAATAAAGTTTCGGACGCAAGCTTCTATGGGATTGCCGGAGGAGTTGCAAGAGGAGGCGCCCCATCGGCAAGAATTGCTGTTTATAGTGCGTGCAGCGGTGAAGATTGTTCAGGTGATGCCATATTAGCTGCTTTTGATGATGCCATTGCTGATGGTGTAGACCTCATCACAATTTCAATTGGGTCAAATGTCCCAGTTCCCTTTGATACAGACCCCATAGCAATTGGATCTTTTCATGCAATGGAAAAAGGGATCCTTACCATAAATGCTGCAGGTAACTCTGGTCCTAAAGGTTTAACATTTAGTGTATCACCTTGGTTATTTAGTGTTGCAGCTACCACCATGGATCGTAGAATCATGGATAAGGTTTTGCTTGGTAATTCATTAACCCTCACGGGGAAGTCAATAAATGCATTTGCATCAAATGGGACAAAGATTCCTATGGTCCATGGAAAGTCAGCTTCACATCTAGATTGTCCATCAACTGAGGAAGCTGAATCTTGTTCTGATATTTGTATGGATCCCAAACGCATAAAAGGAAAAAATCCTCTTGTGTAG 1170 0.4154 MAKHSVLLFLYAYFIIKSIASSGNDDDNKSLHIIYMGSLPKGDYSPTSHHLSMLQQTTNNDAKNHIVRSYHRSFNGFAAMITDQQREMLSKMEGVVSVFPSRTLQLQTTRSWDFMGFQESIQRNSAGESDVIIGVIDSGIWPESESFNDHGFSQIPKKWKGACEGGKNFTCNNKIIGARHYLTEEDSARDVVGHGTHTASTAAGNKVSDASFYGIAGGVARGGAPSARIAVYSACSGEDCSGDAILAAFDDAIADGVDLITISIGSNVPVPFDTDPIAIGSFHAMEKGILTINAAGNSGPKGLTFSVSPWLFSVAATTMDRRIMDKVLLGNSLTLTGKSINAFASNGTKIPMVHGKSASHLDCPSTEEAESCSDICMDPKRIKGKNPLV 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241883g00003 389 Pfam Peptidase inhibitor I9 33 106 IPR010259 -
Stsc241883g00003 389 CDD Peptidases_S8_3 104 319 IPR034197 -
Stsc241883g00003 389 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 49 385 IPR045051 -
Stsc241883g00003 389 Gene3D Peptidase S8/S53 domain 130 319 IPR036852 GO:0004252|GO:0006508
Stsc241883g00003 389 ProSiteProfiles Serine proteases, subtilase domain profile. 111 389 - -
Stsc241883g00003 389 Gene3D - 320 385 - -
Stsc241883g00003 389 Pfam Subtilase family 129 306 IPR000209 GO:0006508|GO:0008236
Stsc241883g00003 389 SUPERFAMILY Subtilisin-like 34 322 IPR036852 GO:0004252|GO:0006508
Stsc241883g00003 389 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 16 107 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241883g00003 Stsc-Chr241883 9001 10170 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241883g00003 27 385 Subtilisin-like Serine Gene Family AT5G59120 58.516 1.90e-147 433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241883g00003 - - ahf:112755745 485.723