Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241883g00002 ATGTCTAATGAATTTGAGGCTAGTGTAGTTTCATATCCTTCGTTAAGCATAGATTCAAAGGCTTATGATCTTGGTTTGGCTTATGCAAATTCCACTACTACCCCTCAGGCTGAAATTTTGAGTAGTGCAACCTTCATAAACGATACCGCTCCCATTATTGCTGATTTCTCTTCTAGAGGACCCAATGTTAATATCCTAGAGATTATGAAGCCAGACATAAGTGCTCCTGGTGTAGAAATTTTGGCTGCTTTTTCACCTCTTGCATCACCGTCTGGAGATTCAAATGATATGAGATCAGTGAAATACAGCATACTCTCTGGAACTTCAATGTCTTGCCCTCATGTTGCTGGCATAGCTGCATATGTTAAGGCTTTTCATCCTGATTGGTCTCCGGCAGCTATAAAATCTTCTATCATGACCACTGCAAAACCAATGAATGAAACCGATAAAGACAAAGAATTTGCTTACGGATCAGGGTTTGTGGATCCAGTTAGAGCCATAAATCCTGGTCTAGTTTTTGATCTTTGTAAAGACGACTATTTGAATTTACTTTGCAGTACTGGGTACGACACGACTCAAGTTCGACAAATATCAGGTGATAATAGCACTTCTTGCCCTTCATCATCATCTCAGTCAGTGGCAAAAGATTTTAATTATCCTTCAATGGTGACACCAGTTCAACCAATGAAACCATTCATGGTTAATTTCACAAGAACTGTCACAAATGTTGGATGTGCTAACTCTACTTATACGGCTAGTGTCCAACAACATTCTGGCATGAACGTTACTATTGTGCCTAACATACTTAAGTTTAAATCTCTAAATGAGAAACAAACTTTTGTTGTTAATGTTGTTGGAGGGGAATTAAATGATAATGATAACAGCTTAGTTTCGTCGTCACTGTTGTGGACCGATGGAACACATAATGTAAGGTCTCCAATTGTTGCATTTGTTCGAAATGTATGA 966 0.3851 MSNEFEASVVSYPSLSIDSKAYDLGLAYANSTTTPQAEILSSATFINDTAPIIADFSSRGPNVNILEIMKPDISAPGVEILAAFSPLASPSGDSNDMRSVKYSILSGTSMSCPHVAGIAAYVKAFHPDWSPAAIKSSIMTTAKPMNETDKDKEFAYGSGFVDPVRAINPGLVFDLCKDDYLNLLCSTGYDTTQVRQISGDNSTSCPSSSSQSVAKDFNYPSMVTPVQPMKPFMVNFTRTVTNVGCANSTYTASVQQHSGMNVTIVPNILKFKSLNEKQTFVVNVVGGELNDNDNSLVSSSLLWTDGTHNVRSPIVAFVRNV 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241883g00002 321 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 10 315 IPR045051 -
Stsc241883g00002 321 ProSiteProfiles Serine proteases, subtilase domain profile. 1 167 - -
Stsc241883g00002 321 Gene3D - 184 318 - -
Stsc241883g00002 321 Pfam Subtilase family 49 159 IPR000209 GO:0006508|GO:0008236
Stsc241883g00002 321 Pfam Fibronectin type-III domain 216 315 IPR041469 -
Stsc241883g00002 321 SUPERFAMILY Subtilisin-like 43 194 IPR036852 GO:0004252|GO:0006508
Stsc241883g00002 321 Gene3D Peptidase S8/S53 domain 47 180 IPR036852 GO:0004252|GO:0006508
Stsc241883g00002 321 ProSitePatterns Serine proteases, subtilase family, serine active site. 107 117 IPR023828 -
Stsc241883g00002 321 Gene3D - 7 46 - -
Stsc241883g00002 321 Coils Coil 314 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241883g00002 Stsc-Chr241883 7980 8945 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241883g00002 6 317 Subtilisin-like Serine Gene Family AT5G59100 50.473 2.72e-103 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241883g00002 - - ahf:112755745 401.749