Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241881g00010 ATGGTGATACTAATACTAGGACTAGCTTCAGCTACATTTCTTGTGATTGTTGCACTTTATGTGTTCTTATACTTGAAAAGATTATCATCAAGGGATTGTAGTGAGAGGAAGAGGGATGTAGAGAGCTCAGAGCAACAGAGAAAGGCAGAAGAAGAAGGAGGAGGAGAGGAGGAGGTGGCTATGAAGGAGGACTTGATGATCTTCCATGGTGGTGAGGATTTGACAATCTGTGACATTTTGGATGCACCAGGTGAGGTTATTGGCAAGTCCAATTATGGAACTTTGTATAAGGCTTTGCTTCAGAGGAGCAACAAGGTGAGGCTTTTGAGGTTTCTGAGGCCTGTTTGCATCATCACCACAAGAGGTGAAGATTTTGATGAGATGATTCAGTTTCTTGGGAGGTTGAGGCACCCCAATTTGGTGCCTCTTCTTGGATTCTACACAGGTCCAAGGGGTGAGAAGCTGCTTGTTCATCCTTTCTATAGGAATGGAAATCTCACTCAATTCATTAGAGATGGAAATGGAGAGTGTTACAAATGGTCTAACATATGCAAAATCTCCTATGGCATTGCCAAAGGATTAGAGCATCTTCACACTGGACTAGACAAACCAATCATCCATGGAAACCTCAAATCGAAAAACATCCTTTTGGACCGGTCTTACCAGCCTTACATCTCAGATTCAAGCCTCCACCTTCTGCTGAATCCTACCGCCGGACAAGAAATACTCGAAAGCTCGGCTGCTCAGGGCTATAAGGCACCAGAGCTCATCAAGATGAAGCATGCAAGCGAAGAGACCGACATATACAGCCTAGGTGTGATCTTCCTCGAATTGCTTTCGGGAAAGGAACCTATCAATGAGCATCCTACACCTGATGAGGATTTCTATCTTCCAAATTTCATGAGAAATGCTGTTCTTGCACATAGAACTTCTGATCTTTACCATCCAGCCATTCTCCTCAGAAACACCAGAGATGACAAGAAGAATTTGGTCGGCGAAGAAAGCATTCTCAAGTTTTTCCAACTTGCAATGGCTTGTTGCTCCCCTTCACCTTCAGTTAGGCCTAACATAAAGCTAGTCCTTAGAAAGCTTGAAGAGATTATACACTAG 1110 0.4351 MVILILGLASATFLVIVALYVFLYLKRLSSRDCSERKRDVESSEQQRKAEEEGGGEEEVAMKEDLMIFHGGEDLTICDILDAPGEVIGKSNYGTLYKALLQRSNKVRLLRFLRPVCIITTRGEDFDEMIQFLGRLRHPNLVPLLGFYTGPRGEKLLVHPFYRNGNLTQFIRDGNGECYKWSNICKISYGIAKGLEHLHTGLDKPIIHGNLKSKNILLDRSYQPYISDSSLHLLLNPTAGQEILESSAAQGYKAPELIKMKHASEETDIYSLGVIFLELLSGKEPINEHPTPDEDFYLPNFMRNAVLAHRTSDLYHPAILLRNTRDDKKNLVGEESILKFFQLAMACCSPSPSVRPNIKLVLRKLEEIIH 369
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Stsc241881g00010 369 Gene3D Phosphorylase Kinase; domain 1 82 160 - -
Stsc241881g00010 369 Gene3D Transferase(Phosphotransferase) domain 1 161 369 - -
Stsc241881g00010 369 ProSiteProfiles Protein kinase domain profile. 81 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241881g00010 369 Pfam Protein tyrosine and serine/threonine kinase 85 310 IPR001245 GO:0004672|GO:0006468
Stsc241881g00010 369 SUPERFAMILY Protein kinase-like (PK-like) 84 365 IPR011009 -
Stsc241881g00010 369 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 13 367 - -
Stsc241881g00010 369 MobiDBLite consensus disorder prediction 36 56 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Stsc241881g00010 Stsc-Chr241881 66688 68778 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241881g00010 27 367 Carbohydrate Esterase AT5G61570 58.601 1.59e-139 399
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Stsc241881g00010 PK_Tyr_Ser-Thr 2.8e-28 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241881g00010 - - adu:107476750 671.774