Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241881g00009 ATGGTGAATACTACCACCATTGCAGCAGGCTCCGATGAATTACAAGTCGGTGGATTCCATGAAATCCTTCACTCCATGCTCCCACCTGATTCCCCCGTTCAGCTCAATTCCGTTCGCATTGCAATGGTGAGTGAGATTAACAGAGAGGAGAATCTGGTTTCGTTGAGGTACCCAAGCCTTCACTCTCTTCGCACTCACTTCACTAATCCAAGCTTCGGAAAACCTGAAGCCAAGAAGATTCCAGCGCTCGACGAGAAATGCGTTATGGATTTCAATTCCGCCGTGAAAGCGCTCTTCAGAAGAGTCCCGATCCTCGAATTCGTTGAGAACAGAGAGTCATGGGCCTTTTGGGCCTCGGCCCAAGAAAAGCCCATTTCCGCCGGCGGTGGAGGACTGAATCTGAATACAATTGCATGCAAGCAAGGTCGGTGCTGGTCTCATCTCAAGTTCACGGGAATGCTTCAGTGGGGCCAACGACGCCACGCTAGCTTCTTGGGCCGCCATGAGGCCCAATTACGGCCCAATCAAGACACGGAGGGGAACAAGAAGAGAAACCGTAGAGTTCTCGAAGAAGATGAAGAAAAAGAAACGACGGCGAAGACGTTGACGTTGACGACTCGTCAATGCAACGCGATTGTTGCAGCTTCAAACGACGTCGTTTCGAATCATGTATCCAACAGAAACACCAAAGCGAAAAACAAGCGCCGGAAAATCGCCATTGATAGATGGTCAGCTCAAAGGTATAACACAGCGGAGGAGAATATGTTGAGGGTGATGAAGGAGAAGGAGGCAGTGTTTGGGAACCCAATTCTGAGGGCAGAGCTGAGATCAGAGGCTAGGAAATACATTGGGGACACTGGTTTATTGGATCATTTGCTCAAGCACATGGCCGGCAAGGTGGCACCAGGAGGAACTGAGAGGTTCCGGCGGCGCCACAATGCTGAGGGCGCCATGGAGTACTGGCTGGAGAGTGCTGACCTTGTCGATGTCCGGCGCCAAGCTGGGGTTCAGGACCCTTTCTGGACTCCGCCGCCTGGTTGGAGCGTTGGCGACATTGTCATTTCTCCACATGATCATGTTCTTGCTGTTGCTCAACTGAATGAGATCAAGCAGGAAATTCTTCAGTTGAAGCAGGAAATGAGGGAGCTTGCAGCAAAGAAGGGAGAGGAAGCATTGGTCACCACCCCTACTTCTATCTTGTCTAACTTAAATTGGGAGGAGAATGCTTCCTTGGGTCCAAAGCAGGAGATCTATGTAGAGTTGATGAACAAGAAGGCTAAAATTGAGGAACAACTGAAGGAAATTTCCCTCACTTTGAGCACCATGGCGGAACAACTGGGGATGCTGAAGGAACCAACAATGTCAGAATCAGCAAATTCAGGGGATGATGCACCGATGCAAGAAAAAAGCACTGAAAAGATAGAAAGGATGATAAGTGGCTTCCAAATTTGCAAGCCAAAAGGGGTATTTGTGTGGCCAAATAGGGATGTATCTTCCCCAAAGGTTGATTCTATTGCACCCATTGATGAAAACCATCCAGCTTCCAAACCCAACACTGAAAACTTGCCAATGCCAATGCCAATGCCTAACCTTTATTCCCATGTTAAGCCACTAGCAGAGAGACGCCCTTTGAGCAATGCTACTTTGACCCATGTCTTTGGGGCCTTTTCCCCTTGCTTTTCTCCACCATTAGACACCCCATGA 1704 0.4912 MVNTTTIAAGSDELQVGGFHEILHSMLPPDSPVQLNSVRIAMVSEINREENLVSLRYPSLHSLRTHFTNPSFGKPEAKKIPALDEKCVMDFNSAVKALFRRVPILEFVENRESWAFWASAQEKPISAGGGGLNLNTIACKQGRCWSHLKFTGMLQWGQRRHASFLGRHEAQLRPNQDTEGNKKRNRRVLEEDEEKETTAKTLTLTTRQCNAIVAASNDVVSNHVSNRNTKAKNKRRKIAIDRWSAQRYNTAEENMLRVMKEKEAVFGNPILRAELRSEARKYIGDTGLLDHLLKHMAGKVAPGGTERFRRRHNAEGAMEYWLESADLVDVRRQAGVQDPFWTPPPGWSVGDIVISPHDHVLAVAQLNEIKQEILQLKQEMRELAAKKGEEALVTTPTSILSNLNWEENASLGPKQEIYVELMNKKAKIEEQLKEISLTLSTMAEQLGMLKEPTMSESANSGDDAPMQEKSTEKIERMISGFQICKPKGVFVWPNRDVSSPKVDSIAPIDENHPASKPNTENLPMPMPMPNLYSHVKPLAERRPLSNATLTHVFGAFSPCFSPPLDTP 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241881g00009 567 MobiDBLite consensus disorder prediction 503 525 - -
Stsc241881g00009 567 Coils Coil 359 386 - -
Stsc241881g00009 567 Coils Coil 418 445 - -
Stsc241881g00009 567 MobiDBLite consensus disorder prediction 167 194 - -
Stsc241881g00009 567 PANTHER PROTEIN DYAD 12 545 IPR044221 GO:0007131|GO:0051177|GO:0051321
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241881g00009 Stsc-Chr241881 58839 61525 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241881g00009 228 323 PHD Transcription Factor Family AT5G22260 36.634 3.83e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241881g00009 - - adu:107478261 997.653