Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241878g00004 ATGGCTGCAGCATTAGAGTGCTGGTCCAGCCGCGCCACCACCACCACCGACGACGACATGGTCGAGCAGGTCCTCATGCGCTCCCACCAAAGATCCGAAGCCCTCACCGCACTCGATCCCCCCTCCTCCTCCTCCTCCTCTTCCTCCTCCACCACCGCCACCTCCTCTTCCACCAAAGACTCCACCAATTCCATCGTCCATAAGAAGCTTCAGAAGCTCTCTCGAAACGTTTCGGAAGCCATTGCGTCACTCAAGAACACACTCAACATTCAAGACTCCAATGCTACAAGGGACCCACTTTCTTCTTCTTCTTCTTCTTCGTCTTCTTCTTCGAGTTCTTCGAAGATCGAAGGGTCACGGAAAGTTGTGTGGGGCTGCGTTGTTCGAAACCTTACTCAGCTTTACCCTGGAAGCCAGTTACCGGAGAAGCTCATGTCCAACATTCGGAAACACTACGATTCTTTGCCACTCAGCTATGCACAGGCTGATTTTGATATGAAGGAAGTGTTTCTTCACATCAAGCTGATGGAACAAGCAGCAGCCAATGACTACCCTGCCATCCTGATTCAAGAGGAGAGTGATGATGGTGGTGGTGGTTGTGATATTGTTAAAGGGTCTGTGTTGAAGCTCACTTTTGCTTGCAACTCTCCGATCTCATGGCCTGCAATGTCTAGTGCATTGGACAGTTCGTCCATTTCCTGCAAGAAAGTTCAGATCTTTGAGAAGAAAGGTTTCACAATTGGGATTGTTCTCCTTGTTGTTCAGCAAGGGCAAGAGAAGCTTGTGAGGACCCGGGTCGAAAATGCTCTCAGATTTGCAACGAAGAAGTCAAAAACCAGTTCTGTGAAGCTCCCCTTTGGTCTCTGTGGGTGCCAGGAAGAGATCTCAAAAGGGAGATCAGAGCTTGGAGAAATTGAAGAAGATGGTAGTGGTGATGCATCATCATGCTATATGATGAGGGAGTTTGAGAATTCAAGCCAAAAGATTCAGCTTCAGGTTCCATTGCCTAGTTCATCTTTTGTTGTGTCAGTGGATGAATGGCAGACTATAAAATCGGGCTGTAATGAGATCGAGAAATGGGTGTTGAATTCGGATAATGTTGAGTTTTTGGAGCAGATTGGACCAAATTCCTACAAGGGTTTCTACAATGGGAAAAGGGTTGGCATTGAAAAACTCAAAGGGTGTGACAAAGGGAATGCTTATGAATTCGAGCTCCGAAAAGATCTTCTTGAACTCATGACTTGTGGCCACAGAAACATCCTTCAGTTTGTTGGTATCTGTGTGGATGATAATCATGGTTTGTGTGTAGTTACCAAGTTCATGGAAGGTGGTTCTGTTCATGACTTGTTGTTGAAGAACAAGAAGATTCATGCAAAGGATATTGTGAGAATTGCAGTTGATATAGCTGAAGGAATCAAGTTCATGAATGATCATGGTGTTGCTTACAGAGACCTTAATTCACAGAGGATCTTGTTGGATAGACATGGGAATGCGTGCTTGGGAGATATGGGAATAGTCACTGCTTGCAAGAGTGTTGGAGAAGCAATGGAGTATGAAACTGATGGATACCGGTGGCTAGCTCCTGAGATAATTGCCGGGGATCCTGAGAGTGTGACGGAGACATGGATGAGCAATGTTTATAGTTTCGGCATGGTAATTTGGGAGATGGTAACTGGTGAAGCAGCATATTCAGCATTATCACCTGTTCAAGCAGCAGTCGGGATTGCTGCTTGTGGCCTTAGACCTGAAATCCCAAAAGACTGTCCACAAACCCTGAAATCAATCATGACAAAGTGCTGGAACAATACTCCATCGAAACGCCCTCAATTCTCTGAGATCTTAGTATTGTTGCTGCGTCCAAATAGCATCAATAGGTAA 1878 0.4585 MAAALECWSSRATTTTDDDMVEQVLMRSHQRSEALTALDPPSSSSSSSSSTTATSSSTKDSTNSIVHKKLQKLSRNVSEAIASLKNTLNIQDSNATRDPLSSSSSSSSSSSSSSKIEGSRKVVWGCVVRNLTQLYPGSQLPEKLMSNIRKHYDSLPLSYAQADFDMKEVFLHIKLMEQAAANDYPAILIQEESDDGGGGCDIVKGSVLKLTFACNSPISWPAMSSALDSSSISCKKVQIFEKKGFTIGIVLLVVQQGQEKLVRTRVENALRFATKKSKTSSVKLPFGLCGCQEEISKGRSELGEIEEDGSGDASSCYMMREFENSSQKIQLQVPLPSSSFVVSVDEWQTIKSGCNEIEKWVLNSDNVEFLEQIGPNSYKGFYNGKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHRNILQFVGICVDDNHGLCVVTKFMEGGSVHDLLLKNKKIHAKDIVRIAVDIAEGIKFMNDHGVAYRDLNSQRILLDRHGNACLGDMGIVTACKSVGEAMEYETDGYRWLAPEIIAGDPESVTETWMSNVYSFGMVIWEMVTGEAAYSALSPVQAAVGIAACGLRPEIPKDCPQTLKSIMTKCWNNTPSKRPQFSEILVLLLRPNSINR 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241878g00004 625 MobiDBLite consensus disorder prediction 92 115 - -
Stsc241878g00004 625 MobiDBLite consensus disorder prediction 26 66 - -
Stsc241878g00004 625 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 43 617 - -
Stsc241878g00004 625 PRINTS Tyrosine kinase catalytic domain signature 544 566 IPR001245 GO:0004672|GO:0006468
Stsc241878g00004 625 PRINTS Tyrosine kinase catalytic domain signature 474 492 IPR001245 GO:0004672|GO:0006468
Stsc241878g00004 625 PRINTS Tyrosine kinase catalytic domain signature 588 610 IPR001245 GO:0004672|GO:0006468
Stsc241878g00004 625 PRINTS Tyrosine kinase catalytic domain signature 438 451 IPR001245 GO:0004672|GO:0006468
Stsc241878g00004 625 MobiDBLite consensus disorder prediction 35 66 - -
Stsc241878g00004 625 Gene3D Transferase(Phosphotransferase) domain 1 360 620 - -
Stsc241878g00004 625 ProSiteProfiles Protein kinase domain profile. 302 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241878g00004 625 Pfam Protein tyrosine and serine/threonine kinase 404 615 IPR001245 GO:0004672|GO:0006468
Stsc241878g00004 625 SUPERFAMILY Protein kinase-like (PK-like) 341 615 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241878g00004 Stsc-Chr241878 57346 62770 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241878g00004 353 617 MAP Kinase Kinase Kinase AT2G17700 32.364 2.08e-50 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Stsc241878g00004 PK_Tyr_Ser-Thr 1.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241878g00004 - - adu:107458330 1135.17